Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0665 ATGGTAGAAGGCGGAAGAGTGCGATTATCTGAGGAGGCTAGAAATGGGTTAGAATTTTTGAAGCGTAAAAGGCTTCAGCGTGCACAAGCCATCGCTGCCACTCAGACAACTGCTGCTAACATGAATAGAAGCGGAGGAGATGCTTTGAGAGCTTCACCTTCATGTGGCACGAGATTGCATGGTAATCCAGATGTGTTTTTCAAGCGGAAGGTGGATAAGTTTGATACAAGCGATTTGGACTGGACTGATAAAATTCCAGAGTGTCCTGTGTATTCACCAACAAAGGAGGAATTTGAAGATCCTTTGATTTACTTGCAAAAGATAGCTCCAGAAGCTTCTAAATATGGTATATGCAAGATTATTTCGCCGTTGAGTGCTTCTGTACCTGCTGGGGTTGTTTTGATGAAGGAGAAAGCAGGATTCAAGTTTACGACCAGAGTGCAGCCTCTTCGCCTTGCTCAATGGGATACTGAAGACAAAGTCACATTTTTTATGAGTGCAAGAAATTATACATTCCGTGAATATGAGAAAATGGCGAACAAGGTTTTTGCACGAAGATATTGCAGCGCTGGAGGTCTTCCTGCCACTTACTTGGAAAAGGAGTTTTGGCATGAAATTGGTCGTGGGAAAATGGATACCGTTGAATATGCATGTGATGTTGATGGCAGTGCCTTTTCATCTTCTCCTACTGATCAGCTTGGGAACAGCAAATGGAATTTAAAGAAACTTTCCCGGTTGCCCAAATCAACTTTGCGTCTCTTGGAAACGTCAATTCCGGGAGTAACAGAACCCATGCTATACATTGGAATGCTGTTTAGTATGTTTGCATGGCATGTGGAGGATCATTATTTGTACAGCATTAACTATCAGCACTGTGGAGCGTCAAAAACATGGTATGGCATCCCTGGTCATGCAGCTTTGGAATTTGAAAGGGTGGTGAGAGAACATGTGTATTCTACGGATATTTTGTCAAGTGATGGAGAAGATGGAGCCTTTGATGTTCTCCTGGGGAAAACAACTTTATTTCCACCTAATATTTTGATGGAGCAAAAAGTCCCTGTCTACAAGGCTGTTCAAAAGCCTGGGGAGTTTGTAATAACTTTCCCTAGAGCATATCATGCAGGCTTCAGTCATGGTTTCAACTGTGGAGAAGCAGTGAATTTTGCACTTGGTGATTGGTTTCCTCTTGGGGCTATTGCAAGCAGGAGATATGCACTCCTTAACAGGGTTCCTTTACTGCCTCATGAAGAACTTCTTTGCAAAGAAGCAATGCTTATTCATACAAGCTTGGAACTTGAAGATTCAGACTTTCCCTCTTCAGACTTGTTATCTCATCATAGAACCAAGATATCTTTTATTAATTTGTTGCGTTTCCAGCATTGTGCTAGCTGGTTACTAATGAAATCAAGGGCGTGTTCAAGTGTTTCTTCTCATTCGCATGGCACAATTCTCTGTAGCTTGTGCAAACGTGACTGTTATATAGCTTATGTTGACTGCAGCTGTCACATGCATCCTGTATGCTTACGCCATGAGGTTAAATCTCTTGACTTCATCTGTGGGAGCAAACACACTCTTTATTTGAGAGAGGATATTGCGGATATGGAAGCTGCAGCCAAGATGTTTGAGCAGGAAGATGGGATAATGGATGAGATAAGCAAGCAATCCAAAAGTTACCAAAATTTGTATTCACATTCTTCGTCAGAAGATATGTTTCAGAGAGCTGAAGCAAATGGATACAAACCTTATTGTGAGCTTAAACTTGATTCTATGATTGAATTTTATACAACTCCTGAACGGTCAACAAATAATCAAGAGCGTGGTACACAAAATCAATTTGTTTTGGGACATTGCTCAGAAATTCCTAAACCAGAAGTGTCAGAGGTTTCCTTTTCTGCTGCATCAACTCTTTGTTCTCTTTCCGAACCTACCGAGTGTTCCTCTGCTCCCGAAAATGCTGAGGGGCAGACCAACTTGAAAATAGGCATGATTGATCGCGAAGAACTTGGCGAAACAATATCCAACAGTGCATGTGAATCTTCTCTATCCTCTGCTTTGTATCAAGAAAGCTCGCCTAAACTGCATGATCTACAGAAACCTGACATGAATCCCATAGTGGAGAATGACAGTGATGATTCTGATTCAGGAATATTTAGGGTGAAGCGCCCTTCCTCTCTTAAAGCAGAGAAAAGAAATTTGAAGGTTGTGGCTTCAAAACATTCTGAGCAGCAGGGACTTAAACGATTGAAGAAAGTCCTTCCTGAAGGGAAAAGCAACAGGCAACAAATGAATTTCAGAACCAGTGAATCAAGTTACAAATATAACCCTGTTAATCCTAAAGTTGATATTGAAATTTCCTCAAAGGACAGATTTGCAAGGGGAAATGGCACTCCCATTTCTGCAAGATATAAAAAGTCAGGCAATGATGAAGTAAGTATGCATATGCAACAAGATAACCACCGGAGAGAGAGGTTAAAGCAAATTTATAGGGAAGCGCATTCCATTGAGGTTGGGCCAAAGCGACTTAAAGTCCGAGGCCCTTCATTTTTGGGCTTAGAGAGCAGGTTGAATTGA 2571 0.415 MVEGGRVRLSEEARNGLEFLKRKRLQRAQAIAATQTTAANMNRSGGDALRASPSCGTRLHGNPDVFFKRKVDKFDTSDLDWTDKIPECPVYSPTKEEFEDPLIYLQKIAPEASKYGICKIISPLSASVPAGVVLMKEKAGFKFTTRVQPLRLAQWDTEDKVTFFMSARNYTFREYEKMANKVFARRYCSAGGLPATYLEKEFWHEIGRGKMDTVEYACDVDGSAFSSSPTDQLGNSKWNLKKLSRLPKSTLRLLETSIPGVTEPMLYIGMLFSMFAWHVEDHYLYSINYQHCGASKTWYGIPGHAALEFERVVREHVYSTDILSSDGEDGAFDVLLGKTTLFPPNILMEQKVPVYKAVQKPGEFVITFPRAYHAGFSHGFNCGEAVNFALGDWFPLGAIASRRYALLNRVPLLPHEELLCKEAMLIHTSLELEDSDFPSSDLLSHHRTKISFINLLRFQHCASWLLMKSRACSSVSSHSHGTILCSLCKRDCYIAYVDCSCHMHPVCLRHEVKSLDFICGSKHTLYLREDIADMEAAAKMFEQEDGIMDEISKQSKSYQNLYSHSSSEDMFQRAEANGYKPYCELKLDSMIEFYTTPERSTNNQERGTQNQFVLGHCSEIPKPEVSEVSFSAASTLCSLSEPTECSSAPENAEGQTNLKIGMIDREELGETISNSACESSLSSALYQESSPKLHDLQKPDMNPIVENDSDDSDSGIFRVKRPSSLKAEKRNLKVVASKHSEQQGLKRLKKVLPEGKSNRQQMNFRTSESSYKYNPVNPKVDIEISSKDRFARGNGTPISARYKKSGNDEVSMHMQQDNHRRERLKQIYREAHSIEVGPKRLKVRGPSFLGLESRLN* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0665 856 SUPERFAMILY Clavaminate synthase-like 166 421 - -
Mal6g0665 856 Gene3D Cupin 81 410 - -
Mal6g0665 856 SMART JmjN_1 87 128 IPR003349 -
Mal6g0665 856 MobiDBLite consensus disorder prediction 691 718 - -
Mal6g0665 856 ProSiteProfiles JmjC domain profile. 235 405 IPR003347 -
Mal6g0665 856 Pfam JmjC domain, hydroxylase 265 388 IPR003347 -
Mal6g0665 856 Pfam jmjN domain 89 121 IPR003349 -
Mal6g0665 856 MobiDBLite consensus disorder prediction 693 718 - -
Mal6g0665 856 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJ) FAMILY PROTEIN / ZINC FINGER (C5HC2 TYPE) FAMILY PROTEIN 56 852 - -
Mal6g0665 856 Pfam C5HC2 zinc finger 485 536 IPR004198 -
Mal6g0665 856 PANTHER LYSINE-SPECIFIC DEMETHYLASE 56 852 - -
Mal6g0665 856 ProSiteProfiles JmjN domain profile. 88 129 IPR003349 -
Mal6g0665 856 SMART cupin_9 232 405 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0665 Mal-Chr6 9288555 9294161 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0665 85 423 JUMONJI Transcription Factor Family AT1G30810 36.386 1.30e-62 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mal6g0665 JmjC 4.9e-39 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0665 - - gmx:100798611 1338.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0665 6 9288555 9294161 Mal6g0665 6 9288555 9294161 ECH