Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0664 ATGTATGGTGATTGTCAAGTAATGTCAACAATGGGAGGAAATGTGGTAGTAAACTCAGAATCTCTCTTCTCTTCTCCGATTCATAGCTCTAGCTTCAACTTTATGCAAACCATGCCTTTTCAACCTTTTTCTTCTTCCATGAAAGAAGAAGATGGAATATTGAGAGGTAAAGAAGAGATAATGGATCAAAGTGGTTCAGGTAGTGAACAAGTTGAAGATAAATCAGGGAATGAACAAGAGATTAATAATGAACAACAAGCTTCAAAGAAGAAACGTTATCATAGACACACTGCTCGCCAGATCCAAGAAATGGAAGCTTTGTTCAAGGAATGTCCACACCCAGATGATAAACAAAGACTGAAACTAAGCCATGATTTGGGACTGAAACCACGGCAGGTTAAGTTCTGGTTTCAGAATCGTCGAACTCAGATGAAGGCACAGCAAGATCGTTCTGATAATGTGATACTTAGGGCAGAGAATGAGAGTTTGAAGAATGAGAACTATAGGCTACAATCGGCGTTACGTAACATTATATGTCCAAATTGTGGTGGGCCATGTATAATGGGCCCTGATATGGGCTTTGATGATCACCAACTTCGATTTGAAAATGCCCGGTTAAAAGAAGAGCTAGAACGTGTGTGCTGCATAACATCAAGATACACTGGTCGTTCACTCCAAACAATGGCACCACCTCCATCTCTAATGCCACCATCACTAGATTTAGACATGAACATTTATCCAAGGCACTTTGATCCAATTCCACCATGCTCAGAAATGATTCCTGTCCCTATGTTACCACCTGAACCATCACATTTTCAAGAGGGTGGTCTCTTACTAATGGAAGATGAAAAATCACTTGCAATGGAACTTGCAGCTTCTTCTATGGCTGAGCTTGTTAAGATGTGTCAAATGAATGAACCACTTTGGATTCGAAACAGTGAGAATGATAGGGAAGTTCTTAATTTTGATGAGCATGCTAGGCTTTTTCAATGGCCTTTGAATCTTAAACAGAGAAATGAGTTGAGGAATGAAGCTACACGTGATGCTGCTGTTGTTATCATGAATAGTGTTACTCTTGTTGATGCTTTTCTTGATGCTCAAAAATGGATGGAATTGTTTCCAACAATTGTTGCTAGAGCAAGAACTGTCCAAATTATAGCTTCTGGTGCTTCTGGTCATGCAAGTGGGACTCTTCAGCTGATGCATGCAGAGTTCCAAGTTCTTTCTCCATTGGTGTCCACTAGAGAGACTCATTTTCTTAGATATTGTCAGCAAAATGCAGAGGAAGGAACCTGGGCCATTGTTGATTTTCCTGTTGACAGCTTCCACCAAAATTTTCAACATTCTTTTCCCAAATACTGCAGAAGGTCCTCTGGCTGTGTGATTCAAGACATGCCAAATGGCTATTCAAGGGTAACATGGGTTGAGCATGCAAAAGTAGTAGAGAAACCTGTCCATCAAATATTTAGTAACTATGTGTATAGTGGAATGGCATTTGGTGCACAACGTTGGTTAGGTGTTTTGCAGAGACAATGTGAAAGGGTTGCAAGTCTCATGGCTAGAAACATATCAGACCTTGGAGTGATACCTTCTCCGGAAGCGCGAAAGAACTTGATGAAACTCGCCAACAGGATGATAAAAACTTTTAGTCTTAATATGACAACTTGTGGTGGTCAATCATGGACTGCTATATCAGATTCACCAGAAGACACTGTTAGAATCACAACTAGGAAAATCACTGAGCCTGGCCAACCTAGTGGTGTGATCCTCGCCGCAGTTTCAACCACTTGGCTTCCTTATTCTCATACCAAAGTCTTTGATCTCCTTCGAGACGAACGCCATAGATCTCAGATGGATGCTCTTTCTAATGGGAACTCATTAAATGAAGTAGCTCACATTGCAAATGGTTCACATCCAGGAAACTGCATTTCGCTTCTTCGCATAAATGTTGCAAGTAACTCATCTCAAAATGTAGAGCTAATGCTGCAAGAGAGTTGCACAGATCAATCAGGAAGCTTAGTAGTCTACACGACAATCGATGTTGATTCAATCCAGCTAGCCATGAGTGGAGAAGACCTTTCTTGCATTGCACTTCTTCCACAAGGGTTCATGATAGTGCCAATGAATTCATCAAATACTGACACAACATCTGATCAAGGTGTCACAGGAACACCATCATCTACTACTGCTAGTGCCAATGCTGCTAACACAGGTTGTCTTCTTATCATGGGGATGCAAGTTCTAGCAAGCACAATTCCTTCTGCAAAGCTCAACCTTTCAAGTGTCACAGCAATCAATAACCACCTCTGCAATACCCTGCATCAAATTGAAAGTGCTCTTTGTAGCAGCACTAACAACAATTGCTTTGTTGGGTCTTGCAGTGAACCTACCACTAGTGCACCCTCCAAGTAG 2412 0.4125 MYGDCQVMSTMGGNVVVNSESLFSSPIHSSSFNFMQTMPFQPFSSSMKEEDGILRGKEEIMDQSGSGSEQVEDKSGNEQEINNEQQASKKKRYHRHTARQIQEMEALFKECPHPDDKQRLKLSHDLGLKPRQVKFWFQNRRTQMKAQQDRSDNVILRAENESLKNENYRLQSALRNIICPNCGGPCIMGPDMGFDDHQLRFENARLKEELERVCCITSRYTGRSLQTMAPPPSLMPPSLDLDMNIYPRHFDPIPPCSEMIPVPMLPPEPSHFQEGGLLLMEDEKSLAMELAASSMAELVKMCQMNEPLWIRNSENDREVLNFDEHARLFQWPLNLKQRNELRNEATRDAAVVIMNSVTLVDAFLDAQKWMELFPTIVARARTVQIIASGASGHASGTLQLMHAEFQVLSPLVSTRETHFLRYCQQNAEEGTWAIVDFPVDSFHQNFQHSFPKYCRRSSGCVIQDMPNGYSRVTWVEHAKVVEKPVHQIFSNYVYSGMAFGAQRWLGVLQRQCERVASLMARNISDLGVIPSPEARKNLMKLANRMIKTFSLNMTTCGGQSWTAISDSPEDTVRITTRKITEPGQPSGVILAAVSTTWLPYSHTKVFDLLRDERHRSQMDALSNGNSLNEVAHIANGSHPGNCISLLRINVASNSSQNVELMLQESCTDQSGSLVVYTTIDVDSIQLAMSGEDLSCIALLPQGFMIVPMNSSNTDTTSDQGVTGTPSSTTASANAANTGCLLIMGMQVLASTIPSAKLNLSSVTAINNHLCNTLHQIESALCSSTNNNCFVGSCSEPTTSAPSK* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0664 803 Gene3D - 292 498 IPR023393 -
Mal6g0664 803 Coils Coil 146 166 - -
Mal6g0664 803 CDD START_ArGLABRA2_like 284 513 - -
Mal6g0664 803 Pfam Homeodomain 90 145 IPR001356 GO:0003677
Mal6g0664 803 ProSitePatterns 'Homeobox' domain signature. 122 145 IPR017970 GO:0000981|GO:0006355
Mal6g0664 803 MobiDBLite consensus disorder prediction 61 97 - -
Mal6g0664 803 ProSiteProfiles START domain profile. 280 517 IPR002913 GO:0008289
Mal6g0664 803 CDD homeodomain 90 148 IPR001356 GO:0003677
Mal6g0664 803 MobiDBLite consensus disorder prediction 73 88 - -
Mal6g0664 803 SUPERFAMILY Bet v1-like 282 516 - -
Mal6g0664 803 ProSiteProfiles 'Homeobox' domain profile. 87 147 IPR001356 GO:0003677
Mal6g0664 803 SUPERFAMILY Homeodomain-like 77 148 IPR009057 -
Mal6g0664 803 Gene3D - 74 158 - -
Mal6g0664 803 SMART START_1 289 514 IPR002913 GO:0008289
Mal6g0664 803 Pfam START domain 290 514 IPR002913 GO:0008289
Mal6g0664 803 SUPERFAMILY Bet v1-like 542 778 - -
Mal6g0664 803 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 75 787 IPR042160 -
Mal6g0664 803 SMART HOX_1 88 151 IPR001356 GO:0003677
Mal6g0664 803 PANTHER - 75 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0664 Mal-Chr6 9236794 9242895 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0664 8 783 Homeobox Transcription Factor Family AT5G46880 55.370 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mal6g0664 START 3.7e-36 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0664 - - cam:101514650 1428.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0664 6 9236794 9242895 Mal6g0664 6 9236794 9242895 ECH
Mal6g0664 6 9236794 9242895 Mal1g2003 1 26319239 26323419 ECH
Mal6g0664 6 9236794 9242895 Mal6g2854 6 75933679 75938470 ECH