Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0629 ATGAAGACTTACTTGGCAAAGCCATGGATGACATTTTCAAGGGTAGTCTTCATTAGCAATGTTATTGATGATTTTGTTCAGCGAGATGGGTACATACCTTGGAACTCAACAAATCCAAACACCGAAAATTCTTACTTCGCTGAGTTTGGCAACACTGGACCAGGTGCCAATGCTACCACAAGGGTGAAATGGGCAAAAGGTCTCATTACCAAGGATGAGGCTGCAAGATTCACCGCCGAACCGTGGCTTCAAGCTACCACATGGTTGCCTTCCACCGGAATTCAATACGATCCCGGCTTCGAGGCTTGA 309 0.4628 MKTYLAKPWMTFSRVVFISNVIDDFVQRDGYIPWNSTNPNTENSYFAEFGNTGPGANATTRVKWAKGLITKDEAARFTAEPWLQATTWLPSTGIQYDPGFEA* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0629 102 Pfam Pectinesterase 2 85 IPR000070 GO:0030599|GO:0042545
Mal6g0629 102 PANTHER PECTINESTERASE 2 100 - -
Mal6g0629 102 PANTHER PECTINESTERASE 2 100 - -
Mal6g0629 102 Gene3D - 1 102 IPR012334 -
Mal6g0629 102 SUPERFAMILY Pectin lyase-like 2 98 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0629 Mal-Chr6 8651403 8651711 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0629 2 100 Carbohydrate Esterase AT3G59010 40.594 1.69e-21 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0629 K01051 - gmx:100808559 151.369