Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0624 ATGGCAGAGAGTGCAGTGAGTTTTCTTCTGCAAAGGCTTGTGCCTGTATTTGAGAATAAGATGAATTTGCTCAGTGGGATTGAAACAGAAGTGGTGTATCTAAAAGGACAGTTGGAGCTCATAACAGCCTTCTTAAAGGTTGCAGATGCATTAGAAGAGAGTGATGAGGAACTCAAAGTTTGGGTTAAGCAAGTCAGAGATGTTGCTCATGAGACTGAAGATATTCTTGATGAATTGGAACTTCTTGTCCAGGCGCGTAATCATACAAACAGATTCTCTGTTTCTCTACGCATTAGGAATATGAAAGCTCGTTATCGGATTGCTCATGAGTTGAAAAGCATCAACTCTCGCATGACAGCTATTTTTTCAAGTCATAAGAGATTCCTCAGACAACTTAACACTTCTTCAGAGGCTTCAAATTCCATTTATACAGCAGGTAAAAGATGGCATGATCAACGAGGAGACGCTCTTCTCCTGGACAACACTGATCTAGTGGGCATAGACAGGCCTAAAAATAAGTTGATTGGGAGGTTGATTAAAGGTTGTCCTGGATGTAAAGTAATTTCCGTTACCGGAATGGGAGGGATGGGAAAAACTACTTTAGTGAAGAAAGTATACGACGATCCAGAGGTGATAAAACACTTCAAAGCATGTGCTTGGGTTACTGTTTCTCAATCTTGTGAAATTGAGGAGCTACTCAGAGACTTGGCCCAAAAACTTTTTTCTGAAATAAGACGCAAAGTTCCAGAAGGCCTGGAAAGCATGCCTAGTGACAAGTTGAAGATGATTATCAAAGAGCTCTTGCAGAGAAGGAGGTACCTAGTTGTATTTGATGATGTGTGGCATATGCATGAATGGGAAGCTGTCAAATATGCACTTCCAAAAAACAATTGCGGTAGCAGGATCATGATCACCACACGCAAAGCTGACTTAGCCTCTATTTCCAGCATAGAATCCAACGGTAAGGTGTATAGCCTACAACCCTTGAAAGAAGAAGAAGCATGGGATCTCTTTTGTAGAAAGACTTTCCAAGGTCACTCATGTCCTTCATATTTAATTGACATTTGTAGTTATATTTTAAGAAAATGTGAGGGTCTTCCCCTTGCAATTGTAGCAATCAGCGGTGTCCTTGCTACAAAAGACAAACACAGGATAGATGAATGGGACATGATTTGCCGTAGTCTTGGAGCTGAAATTCAAGTCAATGGCAAGCTTGATAATCTGAAAACAGTACTTTGCCTCAGTTTTAATGATTTGCCTTACTATTTAAAGTATTGTTTTTTGTATTTAAGCATGTTTCCTGAGGACTATCTGATTCAGCGCATGAGATTGATTCGGTTATGGATAGCAGAAGGATTTATCAAAGCCAAAGACGGAAAAACAATGGAAGATGTTGCAGAGGATTACCTCAAGGAGCTCATAAACAGAAACTTATTACAAGTAGCAGAGACAACATCTGATGGAAGAGTCAAAACTTTGAGAATCCATGATCTTCTGAGGGAGATTATCATTTCGAAGTCCAAGGACCAAAACTTTGCAACAATTGTCAAGGATCAAAATGGGATCTTGCCTGAAAAGATTCGGCGCCTTGCGCAGCACGGTGCACTGCCGAATCCAAATGGACAGCAACATAGATCTGTTTCTCAACTCCGTTCTCTCTTAATGTTTGGAGTGACTGAAAATTTATCCCTTGGAAAACTTTTTCCAGGTGGATTCAAACTACTCAGTGTTTTAGATTATCAAGATGCACCTTTGAAGAAGTTTCCAGTAGCAGTTATCGACCTATATCATTTAACCTATCTGAGTTTAAAGAACACACAGGTGAAAGTGCTTCCAAAATGTGTACTAGGAAAGTTGCAAAATCTAGAAACACTTGATCTTAAGAATACTTGTGTAACAGAATTGCCTGCAGATATAGTAAAGCTTAAAAAGCTTCGCCATCTCCTTGTATATCAGTCTAACGTAGAAGGTTATGCACAATTCCACTCCAAATATGGTTTTAAGGCACCTCTTGAAATAGGAAAATTACAGTCACTACAAAAGCTTTGTTTTGTAGAGGCAAACCAAGGTTGTGGCATGATAATAAGACAGTTGAAGGAGCTAAGCCAACTAAGAAGGTTAGGCATCATGAGACTCAGAGAGGAAGACGGGAAGGATTTCTGTTTGTGTATTGAAAAATTGACTAGTTTATGTGCCTTATCTGTTACTTCTGAAGGTGAGAATAAAGTTATTGATTTGACATCACTTTCTACACCCCCTCCATTTCTTCAAAGATTGTACTTGTCAGGGAGACTACAAGAGTTACCAAGTTGGATACCTTCTCTTCATAACCTATCCAGGTTATTTCTGAAATGGACCTGTTTGAAACATGATCCATTGGTATATCTGCAGGATTTACCAAACCTTGCACATCTTGAACTGCTTCAAGTTTATGATGGTGGTGACAACATGTTGCATTTCAAGCGTGGGAAGTTCAATAAGCTCAAGGTTTTAGGCCTTGACAAATTTGAAGGACTCAATCAGGTGATAGTAGGGAAGGGTGCAATGCCTTGCCTAGAAAAACTGAGCATTGGACGTTGCGAGTCATTGAAGAAGGTGCCGTCAGGGATTGAAAAGTTGAGTAAACTTAAAGTCCTAGAGTTTTTCGATATGCCAGATGAACTCATGACGACAATATGCCCACATGGTCCAGGACAAGATTACTGGAAAGTATCACATATACCAGAGGTTTATTCTACCTACTGGAGAGATGGTGGCTGGGATGTTTATGCACTAAACAGTTTCAGAGATTGTTCTCCCCGATCTGGCACAGTCAGGAGAAGCCATGAACGCCGGAATCAGTGGAAGGTGTAG 2853 0.4013 MAESAVSFLLQRLVPVFENKMNLLSGIETEVVYLKGQLELITAFLKVADALEESDEELKVWVKQVRDVAHETEDILDELELLVQARNHTNRFSVSLRIRNMKARYRIAHELKSINSRMTAIFSSHKRFLRQLNTSSEASNSIYTAGKRWHDQRGDALLLDNTDLVGIDRPKNKLIGRLIKGCPGCKVISVTGMGGMGKTTLVKKVYDDPEVIKHFKACAWVTVSQSCEIEELLRDLAQKLFSEIRRKVPEGLESMPSDKLKMIIKELLQRRRYLVVFDDVWHMHEWEAVKYALPKNNCGSRIMITTRKADLASISSIESNGKVYSLQPLKEEEAWDLFCRKTFQGHSCPSYLIDICSYILRKCEGLPLAIVAISGVLATKDKHRIDEWDMICRSLGAEIQVNGKLDNLKTVLCLSFNDLPYYLKYCFLYLSMFPEDYLIQRMRLIRLWIAEGFIKAKDGKTMEDVAEDYLKELINRNLLQVAETTSDGRVKTLRIHDLLREIIISKSKDQNFATIVKDQNGILPEKIRRLAQHGALPNPNGQQHRSVSQLRSLLMFGVTENLSLGKLFPGGFKLLSVLDYQDAPLKKFPVAVIDLYHLTYLSLKNTQVKVLPKCVLGKLQNLETLDLKNTCVTELPADIVKLKKLRHLLVYQSNVEGYAQFHSKYGFKAPLEIGKLQSLQKLCFVEANQGCGMIIRQLKELSQLRRLGIMRLREEDGKDFCLCIEKLTSLCALSVTSEGENKVIDLTSLSTPPPFLQRLYLSGRLQELPSWIPSLHNLSRLFLKWTCLKHDPLVYLQDLPNLAHLELLQVYDGGDNMLHFKRGKFNKLKVLGLDKFEGLNQVIVGKGAMPCLEKLSIGRCESLKKVPSGIEKLSKLKVLEFFDMPDELMTTICPHGPGQDYWKVSHIPEVYSTYWRDGGWDVYALNSFRDCSPRSGTVRRSHERRNQWKV* 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0624 950 Gene3D Ribonuclease Inhibitor 542 894 IPR032675 -
Mal6g0624 950 Gene3D - 328 415 IPR042197 -
Mal6g0624 950 PANTHER OS08G0539900 PROTEIN 1 126 - -
Mal6g0624 950 PANTHER OS08G0539900 PROTEIN 157 915 - -
Mal6g0624 950 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 430 IPR027417 -
Mal6g0624 950 PANTHER DISEASE RESISTANCE PROTEIN RP 1 126 IPR044974 GO:0006952
Mal6g0624 950 PANTHER DISEASE RESISTANCE PROTEIN RP 157 915 IPR044974 GO:0006952
Mal6g0624 950 Pfam NB-ARC domain 169 417 IPR002182 GO:0043531
Mal6g0624 950 Pfam Leucine rich repeat 597 649 IPR001611 GO:0005515
Mal6g0624 950 Pfam Rx N-terminal domain 5 93 IPR041118 -
Mal6g0624 950 CDD RX-CC_like 2 123 IPR038005 -
Mal6g0624 950 PRINTS Disease resistance protein signature 267 281 - -
Mal6g0624 950 PRINTS Disease resistance protein signature 617 633 - -
Mal6g0624 950 PRINTS Disease resistance protein signature 363 377 - -
Mal6g0624 950 PRINTS Disease resistance protein signature 187 202 - -
Mal6g0624 950 SUPERFAMILY L domain-like 494 886 - -
Mal6g0624 950 Gene3D - 416 507 IPR036388 -
Mal6g0624 950 Gene3D - 159 319 IPR027417 -
Mal6g0624 950 Gene3D - 4 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0624 Mal-Chr6 8582613 8586487 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0624 160 883 WRKY Transcription Factor Family AT4G12020 22.193 4.20e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0624 K13457 - gmx:100817624 1514.59