Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0623 ATGGCAGATAGTTCAGTATCATTTTTATTGGACAAGCTAACATGGTTACTTCAAGAAGAAGTAAATCTACAAAGAGGCGTCCGTGTAGATGTTCAATACATCAAAGACGAACTTGAACGCCACAAGGCCATCTTGATGGTAGCTGATTCATTGGAAGACAAAGACCCTGAACTCAAAGTATGGGTTAAAAGAGTAAGAGATATTGCTCATGACATGGAAGATGCTATAGATGAATACTATCTTCGCCTTGTCGATCATCAGCAAGGCAAAATCAAATCTTCTTTTCACAAGATTCTTTTTGGCATTAAGACCATGAAAGCTAGACACAAAATAGCTTCAAATATACAAGGAATCAAATCCAAAGTTGAAGTTATCTCGCACAGACGTCCGATCATACCTGAGGCAGCTTCAAGCTCAAGTCAAAGGTTTTCATCAAGGCTTGATAGTCAAGGTGATGCCCTTTTGCTAGATGAAGCTGATTTAGTTGGAATTGAACAACCAAAGAAGCAGCTGACTGATTTGCTTTTCAAAGATGAATCAAATAGAGCAGTGATTTCAATCTATGGTATGGGAGGTTTAGGGAAGACTACAATAGCAAAACAAGTCTATGATGATCCAAAAGTCAAGACACGTTTCAAGATGCATGCATGGGTTAATCTCTCTCAATCTTTCAAAATGGAAGAGTTACTGAAAGACCTTGTTGAACAGCTTCATATTCTCATTGGAAAACCAGTTCCAGAAGCAGTTGGAATGATGAAAAGTGACAAGCTGAAAGAGTTGATTAAGAATTTGCTTCAGAGAAGCAGGTATCTAATTGTTCTTGATGATGTGTGGCATGTAAATGTATGGGATGCTGTGAAGCTTTCTTTGCCTAATAACAACCGTGGAAGTAGAGTGATGCTTACGACGCGCAAGAAAGATTTAGCTTTGTATTCTTGTGCTGAATTAGGTAAGGATTTTCACCTTGAATTCTTGCCTGAGCAAGAAGCTTGGTCTCTTTTTTGTAGGAAGACATTTCAAGGTAACTCATGTCCTCCTCATCTTGAAGAAGTTTGTAGGAATATCTTGAAATTGTGTGGAGGGTTACCACTAGCTATTGTGGCAATAAGTGGTGCTTTGGCTACAAGAGGAAGATCAAACATAGAAGAGTGGCAGGTAGTTTGCAGAAGTTTCGGTTCTGAAATTGAAGGCAATGACAAACTGGAAGATATGAAGAAAGTACTTTCCTTAAGTTTCAATGAGTTACCTTATCATCTTAAATCATGTTTGTTGTATTTAACCGTCTTTCCAGAATTTCACGCTATCGAGCATATGAGATTGATTCGATTGTGGATAGCTGAAGGATTTGTAAATGATGAAGATGGTAAGACACTAGAGGAAGTTGCAGATCGTTACCTTAAGGAGCTTTTGAACAGAAGTTTGCTCCAAGTGGTAGAAAAAACCAGTGATGGAAGGATGAAGACTTGTCGAATGCATGACCTCCTAAGGGAAATTGTTAATTTCAAGTCAAGGGATCAGAACTTTGCAACAATAGCCAAAGAACAAGATATGGTATGGCCGGAACGAGTTCGTCGTTTATCGGTCATAAATTCATCACATAATGTACTTAAACAGAATAAGACCATATTCAAACTTAGATCTCTGCTAATGTTTGCATTATCAGATTCACTCAATCATTTTTCTATCCATGAATTATGCTCCTACACTGGTGTAAAGTTGCTCAATGTGTTAGACTTGCAGGATGCACCTTTGGAGGATTTTCCTGTTGAAATTGTCAACCTTTACCTTCTGAAGCATCTAAGTTTGAAGAATACAAAGGTGAAAAACATTCCAAGTTCAATTAAGAAGCTGCAATACTTGGAAACATTAGATCTTAAACACACTGATGTCACGGAATTGCCTATTGAAATTGCGGAGCTGAAACGGTTACGCCACCTCCTGGTGTATCGCTACAAGATTGAATCCTATGCTCATTTCCACTCAAAGCATGGCTTCAAGGTGGCTGCACCTATAGGAAACATGCAATCTTTGCAAAAGCTTTGTTTCATAGAGGTAGATCAAGGAAGTGGAGCATTGATGGTAGAGTTAGGAAAACTCACTCAACTTAGGAGGCTAGGCATTAGAAAAATGAGGAAAGAAGACGGCGCTGCTTTGTGTTCATCTATTGAGAAGATGATCAATCTTAGATCACTTAACATAAATGCAATAGAAGATGAGGAGATAATCGATATTCACAACATTTCAAAGCCTCCTCGGTATCTTCAACAGCTATACTTGAGCGGTCGGTTAGAGAAGTTTCCTCAATGGATAAATTCTCTCAAGAGTTTGGTCAAAGTTTTCTTAAAATGGAGCAGGTTAAAGGAGGATCCTCTTGTGTATCTTCAAGATTTGCCAAATCTTCGACATCTTGAATTTCTTCAAGTTTATGTCGGAGAGACGTTGCATTTCAATGCAAATGGGTTTCCAAGTCTAAAGGTGTTAGGCCTTGATGATTTAGAAGGACTAAAATCAATGATAATTGAGGAAGGAGCAATGCAAGGTCTTAAAAAGTTGGTCATGCAACAATGTGGCTCATTCAAGAATGTGCCATTAGGCATTGAACACTTAACTAAGCTAAAAACAATCGAGTTTTTCGATATGCCTGATGAATTGATTATGGCACTTCATCCAAATGGAGGCAAAGATTATTGGAGAGTACAAAATGTTCCAACAGTTTATTCTACTTATTGGAGGGATGGTGGTTGGGATGTTTATTCATTAGAGACTTTTGGGGAGAGAGAGAGTGATATCGATCATAGTAGTGCAAAGAGGACTCGTGAGCTTCCTACTCTTTGGAAGGTTTAA 2844 0.384 MADSSVSFLLDKLTWLLQEEVNLQRGVRVDVQYIKDELERHKAILMVADSLEDKDPELKVWVKRVRDIAHDMEDAIDEYYLRLVDHQQGKIKSSFHKILFGIKTMKARHKIASNIQGIKSKVEVISHRRPIIPEAASSSSQRFSSRLDSQGDALLLDEADLVGIEQPKKQLTDLLFKDESNRAVISIYGMGGLGKTTIAKQVYDDPKVKTRFKMHAWVNLSQSFKMEELLKDLVEQLHILIGKPVPEAVGMMKSDKLKELIKNLLQRSRYLIVLDDVWHVNVWDAVKLSLPNNNRGSRVMLTTRKKDLALYSCAELGKDFHLEFLPEQEAWSLFCRKTFQGNSCPPHLEEVCRNILKLCGGLPLAIVAISGALATRGRSNIEEWQVVCRSFGSEIEGNDKLEDMKKVLSLSFNELPYHLKSCLLYLTVFPEFHAIEHMRLIRLWIAEGFVNDEDGKTLEEVADRYLKELLNRSLLQVVEKTSDGRMKTCRMHDLLREIVNFKSRDQNFATIAKEQDMVWPERVRRLSVINSSHNVLKQNKTIFKLRSLLMFALSDSLNHFSIHELCSYTGVKLLNVLDLQDAPLEDFPVEIVNLYLLKHLSLKNTKVKNIPSSIKKLQYLETLDLKHTDVTELPIEIAELKRLRHLLVYRYKIESYAHFHSKHGFKVAAPIGNMQSLQKLCFIEVDQGSGALMVELGKLTQLRRLGIRKMRKEDGAALCSSIEKMINLRSLNINAIEDEEIIDIHNISKPPRYLQQLYLSGRLEKFPQWINSLKSLVKVFLKWSRLKEDPLVYLQDLPNLRHLEFLQVYVGETLHFNANGFPSLKVLGLDDLEGLKSMIIEEGAMQGLKKLVMQQCGSFKNVPLGIEHLTKLKTIEFFDMPDELIMALHPNGGKDYWRVQNVPTVYSTYWRDGGWDVYSLETFGERESDIDHSSAKRTRELPTLWKV* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0623 947 PANTHER OS08G0539900 PROTEIN 154 908 - -
Mal6g0623 947 SUPERFAMILY L domain-like 490 884 - -
Mal6g0623 947 Gene3D - 324 411 IPR042197 -
Mal6g0623 947 CDD RX-CC_like 2 126 IPR038005 -
Mal6g0623 947 Pfam Rx N-terminal domain 6 91 IPR041118 -
Mal6g0623 947 PANTHER DISEASE RESISTANCE PROTEIN RP 154 908 IPR044974 GO:0006952
Mal6g0623 947 Gene3D - 5 112 - -
Mal6g0623 947 Gene3D - 149 314 IPR027417 -
Mal6g0623 947 PRINTS Disease resistance protein signature 359 373 - -
Mal6g0623 947 PRINTS Disease resistance protein signature 615 631 - -
Mal6g0623 947 PRINTS Disease resistance protein signature 184 199 - -
Mal6g0623 947 PRINTS Disease resistance protein signature 264 278 - -
Mal6g0623 947 PANTHER DISEASE RESISTANCE PROTEIN RP 1 131 IPR044974 GO:0006952
Mal6g0623 947 PANTHER OS08G0539900 PROTEIN 1 131 - -
Mal6g0623 947 Gene3D Ribonuclease Inhibitor 528 885 IPR032675 -
Mal6g0623 947 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 426 IPR027417 -
Mal6g0623 947 Pfam NB-ARC domain 165 413 IPR002182 GO:0043531
Mal6g0623 947 Gene3D - 412 502 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0623 Mal-Chr6 8574067 8577391 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0623 162 366 WRKY Transcription Factor Family AT5G45050 23.786 3.19e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0623 K13457 - gmx:100305458 1490.71