Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0618 ATGGCAGATAGTTCAGTATCATTTTTATTGGACAAGCTAACTTGGTTACTTCAAGAAGAAGTAATTCTACAAAAAGGGATTCGTGAAGATGTTCAATACATCAAAGATGAACTAGAACGCCACAAAGCTATCTTAATGGTAGCTGATGCATTGGAAGACAAAGATCCTGAACTCAAAGTATGGGTTAAAAGGGTTAGAGAGATTGCTCAAGACATGGAAGATGCTATAGATGAATACAATCTTCACCTTGTTGATCATAAACAAGGCAACAACAAAACTTCTTGTTTTCTTTCAAAAAACAAAACTTCTTGTTTTCATAAGATGGTTTTTGACATCAAGACAATGAAAGCTAGACACAGAATAGCTTTAGATATTAAAGGAATCAAATCCAAAGTTGAAGCTATCTCTCAAGGACGTCCAAATATATCTGGTGTAGGTTCAAACTCAAGTCAAAGGCATTCATCAAGGGTTGATAGTCAAGGTGATGCCCTTTTGCTAGAGGAAGCTGATTTAGTTGGAATTAAAATACCAAAGAAGCATCTGAATGGTCTGCTTTTCAAACGTGAATCAAATAGATCAGTGATTTCAATCTATGGTATGGGAGGTTTAGGGAAGACAACATTGGCAAAACAAGTCTATGATGATCCAAAAGTCAAGAAACAATTCAGGATTCATGCTTGGGTTAATCTCTCTCAATCTTTCAAAATGGAAGAGATACTCAAAGACCTTGTACAACAACTCCATAATGTTATTGGAAAACCAGCTCCAGAATCCATTGGAACGATGAAAATTGACGATCTGAAAGAGCTTATCAAGAATTTTCTTCAGAGAAGTCAAAAGTATCTAATTGTGCTTGATGATGTGTGGCATGTGAAAGTATGGGATCGTGTGAAGCATGCTTTGCCTAATAACAACTGCGGAAGTAGAGTGATACTTACGACACGCAAAAAAGATATAGCTTTGTATTCTTGTGCTGAATTAGGTAAGGATTTTCATCTTGAATTCTTACCTGAGCAAGAAGCTTGGTCTCTTTTTTGTAGGAAGACATTTCAAGGTAACTCATGTCCTCCTCATCTCGAAGAAGTTTGTAGAAACATTTTGAAATTGTGTGGAGGATTGCCTTTAGCAATTGTTGCAATCAGTGGTGCTTTGGCTACAAGAGAAAGATCAAACATAGAAAAGTGGCAAATAGTTTGCAAAAGTTTTGGTTCTGAGATTGAAGGCAATGACAAGTTGGAAGATATGAAGAAAGTACTTTCATTAAGTTTCAATGAGTTGCCTTATTATCTTAAATCATGTTTGTTGTATTTAACCGTCTTTCCAGAATTTCATGCTATCGAGCCTAGGAGATTGATGCGGTTGTGGATAGCTGAAGGGTTTGTAAATGGTGAAGATGGTAAGACACTTGAGGAAGTTGCAGATAGTTACCTTAAGGAGCTTTTGAACAGAAGTTTAATCCAAGTTGTGGAAAAAACCAGTGATGGAAGGATGAAGACGTGTCGAATGCATGATTTTCTAAGGGAAATTGTTAATTTGAAATCAAGAGATCAGAACTTTGCAACAATAGTTAAAGAACAAGATATGACTTGCAGGATGCACCTTTGGAGGATTTTCCTGCTGAAATTGTCAACCTTTACCTTCTGA 1644 0.3637 MADSSVSFLLDKLTWLLQEEVILQKGIREDVQYIKDELERHKAILMVADALEDKDPELKVWVKRVREIAQDMEDAIDEYNLHLVDHKQGNNKTSCFLSKNKTSCFHKMVFDIKTMKARHRIALDIKGIKSKVEAISQGRPNISGVGSNSSQRHSSRVDSQGDALLLEEADLVGIKIPKKHLNGLLFKRESNRSVISIYGMGGLGKTTLAKQVYDDPKVKKQFRIHAWVNLSQSFKMEEILKDLVQQLHNVIGKPAPESIGTMKIDDLKELIKNFLQRSQKYLIVLDDVWHVKVWDRVKHALPNNNCGSRVILTTRKKDIALYSCAELGKDFHLEFLPEQEAWSLFCRKTFQGNSCPPHLEEVCRNILKLCGGLPLAIVAISGALATRERSNIEKWQIVCKSFGSEIEGNDKLEDMKKVLSLSFNELPYYLKSCLLYLTVFPEFHAIEPRRLMRLWIAEGFVNGEDGKTLEEVADSYLKELLNRSLIQVVEKTSDGRMKTCRMHDFLREIVNLKSRDQNFATIVKEQDMTCRMHLWRIFLLKLSTFTF* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0618 547 Gene3D - 423 513 IPR036388 -
Mal6g0618 547 MobiDBLite consensus disorder prediction 139 159 - -
Mal6g0618 547 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 437 IPR027417 -
Mal6g0618 547 PANTHER DISEASE RESISTANCE PROTEIN RP 38 532 IPR044974 GO:0006952
Mal6g0618 547 Gene3D - 335 422 IPR042197 -
Mal6g0618 547 PRINTS Disease resistance protein signature 194 209 - -
Mal6g0618 547 PRINTS Disease resistance protein signature 275 289 - -
Mal6g0618 547 PRINTS Disease resistance protein signature 370 384 - -
Mal6g0618 547 CDD RX-CC_like 2 136 IPR038005 -
Mal6g0618 547 Gene3D - 167 325 IPR027417 -
Mal6g0618 547 MobiDBLite consensus disorder prediction 139 158 - -
Mal6g0618 547 Pfam NB-ARC domain 181 424 IPR002182 GO:0043531
Mal6g0618 547 PANTHER NB-ARC DOMAIN CONTAINING PROTEIN, EXPRESSED 38 532 - -
Mal6g0618 547 Pfam Rx N-terminal domain 6 94 IPR041118 -
Mal6g0618 547 Gene3D - 5 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0618 Mal-Chr6 8524340 8532491 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0618 195 389 WRKY Transcription Factor Family AT5G45050 25.510 5.19e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0618 K13457 - gmx:100305458 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0618 6 8524340 8532491 Mal6g0618 6 8524340 8532491 ECH