Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0614 ATGGAAAAACTTGACACTAATATCACTGATTCGGGTCGCGCCGTTGCAATTCTCTGTAACATGGAACAACAACAGGAGAGACTTGACACCAATATCATTGAGTCGGGTCGTTCCGTCGCAATTCTGAACACTGCTGAGTCAGTACCTGAAGCAAAGAGAGGGCGTAGAGAAAGGATACATTGGACTGAAGATGAGCATGTGTTGTTTCTGAAGGGGCTGAATAAATATGGTTGCGGACATTGGAAAGATATTTCAAAAGAATTTGTGGTGACTAAGACTCCAATTCAAATTGCTAGTCATGCTCAAAAATACTTTATCCACTTAAATGCCACTGAAAAAGAGAAGAGAAGAAAAAGTATTTTCGACACTGTACCTGTTGAGCCACAAATTGAGATATCTCCTTTGGTTACACCTACTGTTGAAGAACATGAGACTCCTCCTCAAGGAATGCAACAAAGAGAAACACAACAAACTGAGATTCCTCCTGCCATTGAAGAGATTCATCCTGTGTTGTGTTTGCTTTATCCAATCGGTAGTATAATTCCTGATACAAAGAAACTTGAGAAGATGCGCAACTTGTTGGCAAAAGAACTTACACAACAAAGTGAGAATTGA 615 0.4 MEKLDTNITDSGRAVAILCNMEQQQERLDTNIIESGRSVAILNTAESVPEAKRGRRERIHWTEDEHVLFLKGLNKYGCGHWKDISKEFVVTKTPIQIASHAQKYFIHLNATEKEKRRKSIFDTVPVEPQIEISPLVTPTVEEHETPPQGMQQRETQQTEIPPAIEEIHPVLCLLYPIGSIIPDTKKLEKMRNLLAKELTQQSEN* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0614 204 PANTHER TRANSCRIPTION FACTOR SRM1 22 164 - -
Mal6g0614 204 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 109 IPR017930 -
Mal6g0614 204 SMART sant 57 107 IPR001005 -
Mal6g0614 204 ProSiteProfiles SANT domain profile. 61 109 IPR017884 -
Mal6g0614 204 PANTHER TRANSCRIPTION FACTOR KUA1 22 164 - -
Mal6g0614 204 Pfam Myb-like DNA-binding domain 61 105 IPR001005 -
Mal6g0614 204 Gene3D - 60 107 - -
Mal6g0614 204 ProSiteProfiles Myb-like domain profile. 53 105 IPR001005 -
Mal6g0614 204 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 57 107 IPR006447 GO:0003677
Mal6g0614 204 CDD SANT 61 105 IPR001005 -
Mal6g0614 204 SUPERFAMILY Homeodomain-like 55 109 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0614 Mal-Chr6 8464166 8465451 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal6g0614 Myb_DNA-binding 4.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0614 - - mtr:MTR_5g088060 167.162