Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0612 ATGGAAGGAAAGAGAATAAAACTATTTGGTAAATATATTGTTGTAAACGAGCGGACTTCAATGCAAGACCCCTTTGAGGAACAACAGGAGAAACCTAACAACGATGTCATTGACTCAGGTCGTGCCGTCGCGATTCTAAATACTAGTGATGCTAACTTAATTCAAGCTGAGTCATTACCAGAAGAAAGTCATGCCCCAAGTAGAGTGCAGAGGAAAACGATGCATTGGACAGAAGATGAACACAAGTTGTTTCTTAAGGGGCTGAAAAAATACGGTAAGGGACGTTGGAAAGATATTTCAAAAGAATTTGTGGTGACTAAGACTCCAATTCAAATTGCTACTCATGCCCAAAAATACTTTATCCACCTAAATGCCACTGAAAAAGAGAAGAAGAGGAGAAGAAGTATCCATGACACATCTGTTGAAGAACAAGATGAGATTCCTTCAATTGAGAAACAAAGTGAGATTCCTCATTTAGTTACTGCTCCTATAGAAGATCAACAAAATGAGATTCCTCCTATGTTGTGCTTGCTTTATCCAATCGGTTCTACACTTCCCGATATGAAGAAACTTGAGAAGATGCGCAACTTGTTGGCAAAAGAGCTTGAAGCTGAAACACAACAAAGTGAGAATTGA 636 0.3884 MEGKRIKLFGKYIVVNERTSMQDPFEEQQEKPNNDVIDSGRAVAILNTSDANLIQAESLPEESHAPSRVQRKTMHWTEDEHKLFLKGLKKYGKGRWKDISKEFVVTKTPIQIATHAQKYFIHLNATEKEKKRRRSIHDTSVEEQDEIPSIEKQSEIPHLVTAPIEDQQNEIPPMLCLLYPIGSTLPDMKKLEKMRNLLAKELEAETQQSEN* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0612 211 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 72 122 IPR006447 GO:0003677
Mal6g0612 211 MobiDBLite consensus disorder prediction 131 154 - -
Mal6g0612 211 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 124 IPR017930 -
Mal6g0612 211 SMART sant 72 122 IPR001005 -
Mal6g0612 211 PANTHER TRANSCRIPTION FACTOR KUA1 6 159 - -
Mal6g0612 211 PANTHER TRANSCRIPTION FACTOR SRM1 6 159 - -
Mal6g0612 211 Coils Coil 188 211 - -
Mal6g0612 211 Pfam Myb-like DNA-binding domain 74 120 IPR001005 -
Mal6g0612 211 MobiDBLite consensus disorder prediction 131 152 - -
Mal6g0612 211 ProSiteProfiles Myb-like domain profile. 68 120 IPR001005 -
Mal6g0612 211 CDD SANT 76 120 IPR001005 -
Mal6g0612 211 ProSiteProfiles SANT domain profile. 76 124 IPR017884 -
Mal6g0612 211 SUPERFAMILY Homeodomain-like 69 124 IPR009057 -
Mal6g0612 211 Gene3D - 74 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0612 Mal-Chr6 8283747 8285076 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal6g0612 Myb_DNA-binding 2.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0612 - - mtr:MTR_5g088010 207.223