Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0609 ATGGAAGGAGGAAAAAATAATCCATTCCCTCCTCATCTTGATTTAAATGGGTGGGCTTCAGTTGAAGATTACATTGAGGCGGGTCTTCCCATCCCGTTTCTAAACTCTAATGATAAGAACTCAATTCAAGCCGATATCATTGACTCAGGTCGTGCTGTCGCGATTCTATACACTAGTGATACTAACTTAATTCAAGCTGAGTCAATACCAGAAGAAAGTCATGCCCCAAATAGAGTGCAGAGGAAAACGATACATTGGACAGAAGATGAACACAAGTTGTTTCTGAAGGGGCTGAATAAACATGGTAAGGGACGTTGGAAAAATATTGCAAAAGAATTTGTGGTGACAAAAACTCCAGCTCAAATTGCCAGCCATGCCCAAAAATACTTTATCCACCTAAATGCCACAGAAAACGAGAAGAAGAAGAAGAGAAGATTAAGTATTCACGACACAACCTTAAACAACAATGACACATCTAATCAGATTCCTCCTCCAACTGGCAAGGACAATGGCAACTTAGTCATTCAACAAATGCAACAAACACAGCCACAAAATTGA 558 0.3978 MEGGKNNPFPPHLDLNGWASVEDYIEAGLPIPFLNSNDKNSIQADIIDSGRAVAILYTSDTNLIQAESIPEESHAPNRVQRKTIHWTEDEHKLFLKGLNKHGKGRWKNIAKEFVVTKTPAQIASHAQKYFIHLNATENEKKKKRRLSIHDTTLNNNDTSNQIPPPTGKDNGNLVIQQMQQTQPQN* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0609 185 SMART sant 82 132 IPR001005 -
Mal6g0609 185 MobiDBLite consensus disorder prediction 150 172 - -
Mal6g0609 185 CDD SANT 86 130 IPR001005 -
Mal6g0609 185 Gene3D - 84 135 - -
Mal6g0609 185 MobiDBLite consensus disorder prediction 151 172 - -
Mal6g0609 185 PANTHER TRANSCRIPTION FACTOR KUA1 37 181 - -
Mal6g0609 185 PANTHER TRANSCRIPTION FACTOR SRM1 37 181 - -
Mal6g0609 185 SUPERFAMILY Homeodomain-like 79 134 IPR009057 -
Mal6g0609 185 ProSiteProfiles SANT domain profile. 86 134 IPR017884 -
Mal6g0609 185 Pfam Myb-like DNA-binding domain 86 130 IPR001005 -
Mal6g0609 185 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 78 134 IPR017930 -
Mal6g0609 185 ProSiteProfiles Myb-like domain profile. 78 130 IPR001005 -
Mal6g0609 185 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 82 132 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0609 Mal-Chr6 8142273 8143823 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal6g0609 Myb_DNA-binding 1.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0609 - - mtr:MTR_5g088010 185.267