Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0608 ATGGAAGGAAGAAAAATGCAACAACTACCTCGTGAAATTGATTTAAATGAGCGAACTCCAATTCAAGATTCCTCAGAGAATAGCATGGAACAACACCAGGAGAAACTGGACACCGATATCATAGAGTCGGATCGTGCCGTCGCAAGTCTAAACTCTAATGATAATAATAACTTACTTGAAGCTGAGGCAGTTCCAGAAGAAAGTCATGAAGGAAAGAGAGGGCGTAGGGAAAGGGTACATTGGACGGAAGATGAACATAAGTTGTTTCTCAAGGGGCTGAAAAAATATGGTAAGGGACGTTGGAAAGATATTTCAAAAGAATTTGTTGTGACCAAGACTCCAATTCAAATTGCTAGTCATGCCCAAAAATACTTTATCCACTTAAATGCCACCGAAAAAGAAAAGAAGAGGAGAAGAAGTATCCATGACACATCTGTTGAAGAACAAGAAGATGTGATTCCTTCAATTGAGAAACAAAGTGAGATTCCTCATTTAGTTACTGCTCCTATCGAAGATCAACAAAATGAGATTCCTCCTATGTTGTGTTTGCTTTTTCCAATCGGTTCTACACTTCCTGATATGAAGAAAATTGAGAAGATGCGCAACTTGTTGGCAAAAGAACTTTGA 627 0.386 MEGRKMQQLPREIDLNERTPIQDSSENSMEQHQEKLDTDIIESDRAVASLNSNDNNNLLEAEAVPEESHEGKRGRRERVHWTEDEHKLFLKGLKKYGKGRWKDISKEFVVTKTPIQIASHAQKYFIHLNATEKEKKRRRSIHDTSVEEQEDVIPSIEKQSEIPHLVTAPIEDQQNEIPPMLCLLFPIGSTLPDMKKIEKMRNLLAKEL* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0608 208 MobiDBLite consensus disorder prediction 52 78 - -
Mal6g0608 208 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 78 129 IPR017930 -
Mal6g0608 208 ProSiteProfiles Myb-like domain profile. 73 125 IPR001005 -
Mal6g0608 208 ProSiteProfiles SANT domain profile. 81 129 IPR017884 -
Mal6g0608 208 CDD SANT 81 125 IPR001005 -
Mal6g0608 208 SMART sant 77 127 IPR001005 -
Mal6g0608 208 Gene3D - 79 130 - -
Mal6g0608 208 MobiDBLite consensus disorder prediction 1 19 - -
Mal6g0608 208 PANTHER TRANSCRIPTION FACTOR KUA1 6 164 - -
Mal6g0608 208 MobiDBLite consensus disorder prediction 1 36 - -
Mal6g0608 208 PANTHER TRANSCRIPTION FACTOR SRM1 6 164 - -
Mal6g0608 208 MobiDBLite consensus disorder prediction 63 78 - -
Mal6g0608 208 SUPERFAMILY Homeodomain-like 75 129 IPR009057 -
Mal6g0608 208 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 77 127 IPR006447 GO:0003677
Mal6g0608 208 Pfam Myb-like DNA-binding domain 78 125 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0608 Mal-Chr6 8137023 8139226 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal6g0608 Myb_DNA-binding 3.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0608 - - mtr:MTR_5g027550 223.787