Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0602 ATGATGGAAAATGGAGGGAGAGGAGGAATTGAAGGGTATGATGGAGTGATGATGACGATGACGAGAGACCCGAAGCCGAGGCTTAGGTGGACAGCCGATCTTCACGACCGATTTGTTGATGCAGTCACAAAGCTTGGTGGCCCTGAGAAGGCAACTCCCAAGTCTGTTTTAAGGTTAATGGGCTTAAAAGGTTTGACATTATATCATTTGAAGAGCCATTTACAGAAGTATAGACTTGGACAACATGCTCGAAAACAAAATGAAGAACAATTCAAGGAGAATAATAGATGTTCATATGTAAATTTCAGTAACCATTCTTCAGGGACTAATACCATTTATGGAGGTGATAATGAACGAGGAGAAATCCCAATTAGAGATGCACTAAGCCAACAAATTGAAGTTCAAAAGAGATTGGAAGAGCAACTTGAGGTACAAAAGAAACTGCAAATGAGAATAGAAGCACAAGGGAAGTTTTTGCAGACAGTGTTAGAGAAAGCACAAAGTAGTCTTTCTCAAGATGGACAGGACAATCTTGAAGCATCAAAAACCCAATTGGCTGAATTCAACTCAGCTTTGTCAAATTTCATGGAAAATATGAATAAAGATAGTAAAGAAAACATACTAGACATTAATGAATTTTATAATAAGAATCATAGCTCATCTTTCAATTATCATGAAGTACTAGGGACAGAAGAAAATAAGGTGCTAAAGCCTCAAGTTGAAGGGGGTTCAATGCAGCTAGACTTAAACATGAAAGGTGGCAATGAACTTGTATCTGTAGATGGAGCTGAAATGGATTCAAAGATGGTTTCATATAGGGTGTACCATTTTTGA 834 0.3789 MMENGGRGGIEGYDGVMMTMTRDPKPRLRWTADLHDRFVDAVTKLGGPEKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGQHARKQNEEQFKENNRCSYVNFSNHSSGTNTIYGGDNERGEIPIRDALSQQIEVQKRLEEQLEVQKKLQMRIEAQGKFLQTVLEKAQSSLSQDGQDNLEASKTQLAEFNSALSNFMENMNKDSKENILDINEFYNKNHSSSFNYHEVLGTEENKVLKPQVEGGSMQLDLNMKGGNELVSVDGAEMDSKMVSYRVYHF* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0602 277 Gene3D - 24 82 - -
Mal6g0602 277 Pfam MYB-CC type transfactor, LHEQLE motif 123 168 IPR025756 -
Mal6g0602 277 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 82 IPR017930 -
Mal6g0602 277 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 25 80 IPR006447 GO:0003677
Mal6g0602 277 SUPERFAMILY Homeodomain-like 25 81 IPR009057 -
Mal6g0602 277 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 15 260 - -
Mal6g0602 277 Coils Coil 125 155 - -
Mal6g0602 277 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 15 260 IPR044848 GO:0003700
Mal6g0602 277 Pfam Myb-like DNA-binding domain 28 78 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0602 Mal-Chr6 8041211 8044017 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0602 16 194 G2-like Transcription Factor Family AT3G24120 50.270 3.64e-56 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mal6g0602 Myb_DNA-binding 3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0602 - - gmx:100810146 408.297