Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0599 ATGGTTGTTACCATGGATAATAACAATGAAGAGCAGATTCTGAGCAATAGTGGCAATACAACACAGTGCATGGATTTTGCAACTACTCAAAGTGATATGAATGATGGTTTAAGATCTGGTGGAAGTGATGCACGAGAAGGTTATGTTGATATAGATGATGGTATGCCATTTGATGTTGAGAGCTTAGTTGGAATTGCAGTAGATTGGTTGGAAGATATGGGCAAAATTGATTTCAAGAACTTAACTGCAATTGATTTACTGAAGTTTCACTTTCCAAATGTTGGGATTGCTTTTTCTTTTTACAATTGGTTTGCTCGAATGAATGGTTTTTCCGCTCGTAAAAGTAAAGTAAGGAGAAACAAACACAGGGAAATTATACAACAGAAATTTGTGTGCTACAGACAAGGTTTTAGAGAAGATAGGTTTGTCAATGGTAAAACTCGTAAGCGCGAAGCGAGAGCTGATACAAGGTGTGGATGTGATGCCAAATGTAATGTTCACATTGATTTTGGTAGTCAGCGTTGGCCATAG 531 0.3748 MVVTMDNNNEEQILSNSGNTTQCMDFATTQSDMNDGLRSGGSDAREGYVDIDDGMPFDVESLVGIAVDWLEDMGKIDFKNLTAIDLLKFHFPNVGIAFSFYNWFARMNGFSARKSKVRRNKHREIIQQKFVCYRQGFREDRFVNGKTRKREARADTRCGCDAKCNVHIDFGSQRWP* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0599 176 Pfam FAR1 DNA-binding domain 99 170 IPR004330 -
Mal6g0599 176 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 5 175 - -
Mal6g0599 176 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 5 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0599 Mal-Chr6 7945510 7946224 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal6g0599 FAR1 1.9e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0599 - - mtr:MTR_2g101460 199.519