Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0590 ATGAGCATTCAACCACCACCGCCGTCACAGCTGATGTGGCCACCAATTCATCCACCGTTCACAGTTTCCCAATGGCAAGAGCTTGAACACCAAGCTCTCATCTTCAAGTATCTCAAATCTGGTTTATCTGTTCCTCCTGACCTCCTTTTACCTATTCGGAAAAGTCTTCAGTTCATGTCTCATCCATCTCTGGGTTATTATGGTAAAAAAATTGACCCAGAACCAGGTAGGTGCAGAAGAACTGATGGAAAAAAATGGAGATGTTCTAGGGATGCTCATCCTGATTCTAAGTACTGTGACCGTCATATGATTCGACGTCGTTACCGTTCAAGAAAGCCTGTGGAATCTTCTTCTTCTTCTTCACAATCTTCATCTTCAGTTTCAGTTTCTAGTACTTCACAACAAATTGGTGGTTCTTCTGTTGGAACTAGTGCTACAGTTTCTGCTTCTGTTAGTGCTACTTCAAGTTTTCATACACTTCCTTTGCATACAAATGGTACTCGTGAAGGTTTAGATTTCGATCCCATGAAGAACATGGCCTTCATGGCCCCTATTCTTCTTCCTCTTTCTAAGAAACCTTATAGGTTTGGACTGAACTCCGAAGCAGAGGAGCACAACCTCTTACAGAAGGATCCAGGAACTGTGAAGTATCAAGGTTATGACTTCACTTCAGATGGCATGTGGTATAATAACATATCTCAGCTTTCATCAAACACTGTTTCAGAATCAAGGAATGGTTCTTCCATGGTTGGCAACTACAACTTCCAACAGCAAACAACAAGAGAGCCTGAGCTGTTTAACCTCGACGCTGCAAGGTCCAAGGAAATCGTTTTTAACGGCCAGTTAGGTAGTTTGAAACAGGAATATCCATCCTCTCAGTCTCTCTTCAGTGACTGGCAGTGGAAGAAAGATTTAGCCTCCTCTGCCATGGAGTATAGACCAAGCAAGGATTTCAACACCAATCCAGATGTCAATGTTGATTGA 984 0.4258 MSIQPPPPSQLMWPPIHPPFTVSQWQELEHQALIFKYLKSGLSVPPDLLLPIRKSLQFMSHPSLGYYGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCDRHMIRRRYRSRKPVESSSSSSQSSSSVSVSSTSQQIGGSSVGTSATVSASVSATSSFHTLPLHTNGTREGLDFDPMKNMAFMAPILLPLSKKPYRFGLNSEAEEHNLLQKDPGTVKYQGYDFTSDGMWYNNISQLSSNTVSESRNGSSMVGNYNFQQQTTREPELFNLDAARSKEIVFNGQLGSLKQEYPSSQSLFSDWQWKKDLASSAMEYRPSKDFNTNPDVNVD* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0590 327 MobiDBLite consensus disorder prediction 114 142 - -
Mal6g0590 327 MobiDBLite consensus disorder prediction 71 94 - -
Mal6g0590 327 PANTHER - 1 327 IPR031137 GO:0005634|GO:0006351|GO:0032502
Mal6g0590 327 MobiDBLite consensus disorder prediction 72 94 - -
Mal6g0590 327 Pfam QLQ 19 53 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mal6g0590 327 SMART QLQ_2 18 54 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mal6g0590 327 PANTHER GROWTH-REGULATING FACTOR 1 327 - -
Mal6g0590 327 MobiDBLite consensus disorder prediction 109 142 - -
Mal6g0590 327 ProSiteProfiles WRC domain profile. 72 116 IPR014977 -
Mal6g0590 327 ProSiteProfiles QLQ domain profile. 19 54 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mal6g0590 327 Pfam WRC 73 115 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0590 Mal-Chr6 7835532 7838138 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0590 18 115 GRF Transcription Factor Family AT3G13960 59.091 8.47e-40 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mal6g0590 WRC 2.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0590 - - lja:Lj2g3v1537380.1 415.616