Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0587 ATGGGTGCAGGAGCAAAAATGTTGCAATGCATAACATGTACTAACAAGCAAGTGGTGGAAGATGGTGATGAACAACAAGTTGGTCAGATGAGTGGCACACCAACCACCAAAGAACCCTCCAAAGGCTTGACTGCTCAGATAAAGGATATAGTCCTAAAGTTTACAAGTGCTTGCAAAAAAAGTTCCAGTTCTAACAAAAGAGGACTGAAATCTTATGCAAACTCTGAAGCCAATTCTGAAGGGGTTCAATACCCTTATATGGGAGGTGTGAGTGCAGGTTCAACTCCTCCTTCGGACTGGCTTGCCAATTTCGCCGCTGGAAGATTTGATCAAAGGCTTACATGGGGAACTAGTGGTAACCAAACCCCTAGAGTGCAAGAGCAAGTTGTAGCAGCACCTGAGGCTGTGGTGGAGGAAGTGGATGGAAACAATGAGTGGGTGGCTCAGGTGGAGCCAGGGGTTGATGTTACCTTTCTGTCTCTTCCTGATGGTGGAAATGATCTCAGAAGAATTCGCTTCAACCGAGAAATATTTGATAAGCGGCGAGCTCAAGTATGGTGGGGTGAGAATTTCGACAGACTCAGGGAGCTGTATAATGTCCAGAGTTTCAATCGCCAAGCTCTCAAAACTGCTCTGCAATCTGAGGATGAGCAGCGAGGTTCTTCTTACTCAAGACCTCATTCTGGAAGAGATGGCCTTGTGGCTGCGTGGGCAAACAATGATCCAATGCTGATGAATCATTACTATAATCCATCTGGATTCACTATGGGTCAAGGCAGCAGTAGCCACCAGCACATGCATGCACCAGGATCATCCATGGAAGTGTCAAGGTCTTCTTCTAAAAATGAGCTTTCCTTCAGCAATGCTAGTGAAATTGAGTCTGAATGGATTGAGCAAGTTGAGCCTGGAGTGTTTGTCACAGTCAGGCAGTCACCTGATGGGACAAATGAGCTTCGACGTATCAAATTCAGCCGACAGAGGTTTGGAGATGAAGAAGCTAGAAAATGGTGGGATGAAAACAGAGAAAGACTTCGAGCTCAATACCTGTGA 1050 0.459 MGAGAKMLQCITCTNKQVVEDGDEQQVGQMSGTPTTKEPSKGLTAQIKDIVLKFTSACKKSSSSNKRGLKSYANSEANSEGVQYPYMGGVSAGSTPPSDWLANFAAGRFDQRLTWGTSGNQTPRVQEQVVAAPEAVVEEVDGNNEWVAQVEPGVDVTFLSLPDGGNDLRRIRFNREIFDKRRAQVWWGENFDRLRELYNVQSFNRQALKTALQSEDEQRGSSYSRPHSGRDGLVAAWANNDPMLMNHYYNPSGFTMGQGSSSHQHMHAPGSSMEVSRSSSKNELSFSNASEIESEWIEQVEPGVFVTVRQSPDGTNELRRIKFSRQRFGDEEARKWWDENRERLRAQYL* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0587 349 MobiDBLite consensus disorder prediction 257 278 - -
Mal6g0587 349 ProSiteProfiles BRX domain profile. 294 349 IPR013591 -
Mal6g0587 349 ProSiteProfiles BRX domain profile. 144 199 IPR013591 -
Mal6g0587 349 PANTHER PROTEIN BREVIS RADIX-LIKE 1 7 349 - -
Mal6g0587 349 PANTHER PROTEIN BREVIS RADIX-LIKE 1 7 349 IPR044532 -
Mal6g0587 349 Pfam Transcription factor regulating root and shoot growth via Pin3 144 198 IPR013591 -
Mal6g0587 349 Pfam Transcription factor regulating root and shoot growth via Pin3 293 348 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0587 Mal-Chr6 7749573 7754984 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0587 6 349 Major Intrinsic Protein MIP AT1G31880 47.339 1.11e-97 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0587 - - mtr:MTR_5g026970 466.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0587 6 7749573 7754984 Mal6g0587 6 7749573 7754984 ECH