Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0575 ATGATGGAGTCCAGTGAGCATGAGAGGTTGTCAGTTAGAGAGGTTCATGCAAATGGAAGCCGCATGGTTGCATCAGAAGTTGAGGCTAAGCTTGATGAAGGAAATATTCAAGAGGCGGAATCTGCATTGCGAGAAGGGTTGTCACTCAATTTTGAGGAAGCAAGGGCTCTTCTTGGGAAGTTGGAGTATCAGAGAGGTAATGTAGAAGGTGCTCTCCGTGTCTTTGATGGGATCGATCTCCATGCTGCCATCCAGCGGTTGCAACCCTCGTTTTCTGAAAAACCACCCGTCAAAAAAGGTCGTACTCGCACAGAATCACCTTCTTCAGTCTCTCAGCATGCTGCTAGTTTGGTGCTTGAAGCCATCTACTTAAAAGCCAAGTCTCAACAAAAACTGGGGAAATTTGCTGAAGCTGCTAATGACTGTAAACGTATTCTTGATGCTGTTGAGAAGATATTTTATCAGGGCATATCTGATTTTCAAGTGGACGGTAAACTGCAAGAGATAGTCAGCCATGCAGTAGAGCTCCTTCCAGAGCTTTGGAAACAAGGAGGTTGCTACGACGAGGCAATCTCTGCTTATAGGCGTGCCCTTCTCAGTCAATGGAACCTCGATAATGATTGTTGTTCAAGAATTCAGAAATCATTTGTTGTTTTTCTGCTGTACAGTGGTGTGGAGGCAAGTCCGCCTAGTTTAGCAGTTCAGATTGACGGTTCTTATGTGCCTAAAAATAATCTCGAAGAGGCCATTCTGCTTTTAATGATTCTTATAAGAAAGTGTTGTCTTGGTAAGATAAAATGGGATCCTTCAATCATGGAGCACCTAACGTTTGCACTTTCTGTATGTAGCCAAACTTCCGTTTTAGCAAAGCAATTTGAAGACTTGATGCCTGGAGTATACCATCGTATTGATCGTTGGAATTCTTTAGCTTTATGTCATTGTGCAGCCGGACAAAATGTCAGTGCTTTGAATCTGCTAAGGAAGTCCTTGCACAAACACGAACGACCAGACGACCTTACATCATTATTATTAGCTGCTAAGATCTGCAGTGAGGATAGCTATCTTGCCGGTGAGGGAGTTGGCCATGCGCAGAGGGCAATTAAGAATGCTCATGGTCCAAATGAGCATTTAAAGGGTGTTGCTCTTAGAATGTTGGGACTTTGTCTTGGAAAGCAAGCTAAAGTTGCTTCCTCCGACTTTGAGAGGTCTCGGCTTCAGTCCAAAGCTCTGGAGTCATTGGAGGAGGCAACTAGATTGGAGAAAAATAATTCTGATCTGATTTTTGAGTTGGCGGTTCAGTACGCTGAGCACCGTAATCTGACCGCTGCTTTGCGGTCTGCGCGGCATTTCTTCAACGAAACTGGCGGCTCAATAGTGAAAGCTTGGATATTACTTGCTCTGATTTTGTCGGCACAACAAAGATTTCCAGAAGCTGAAGTGGTGACAGATGCTGCTTTAGATCAGACTGTGAAATGGGAGCAGGGGCCTCTGCTTAAGCTTAAAGCAAAGCTGAAGATCTCCCAATCAAAATCGATGGATGCTATTGAAACCTATCGCTACCTTCTTGCATTGGTTCAAGCCCAGAGGAAATCCTTTGGGTCTTTCCAAATTAGTTCGAAGGTTGAAGATGATAAAGTTAATGAATTCGATATTTGGCATGGTCTTGCAAATTTATATGCCAGCCTTTCTCATTGGAAGGATGCTGAAATCTGTTTGCAAAAGGCCAGGGAGTTGAAGGAGTACTCTGCAGAAATTTTGCGCACTGAAGGTATTTTATTTGAAGGACGCGGGCAAAATCAAGAAGCTCTCAACGCTACCATTAATGCTATACTACTTGAACCAAACCACGTTCCAAGCAAAATCTTAATGAGTGCTTTGATTCATAAAATGGGTTCAAAGGCTTTGCCTGCTGCGAGAAGCATGCTGTCTGATGCGCTTAGAATAGAACCAACCAATCGCGTGGCTTGGTATTATTTGGGATTGATTCACAAGCACGATGGCCGAATGGGTGATGCTGCGGACTGCTTCCAGGCAGCTTCCATGCTGGAAGAATTTGATCCCATCGAAAGTTTCAGCACCGTACTTTGA 2088 0.4401 MMESSEHERLSVREVHANGSRMVASEVEAKLDEGNIQEAESALREGLSLNFEEARALLGKLEYQRGNVEGALRVFDGIDLHAAIQRLQPSFSEKPPVKKGRTRTESPSSVSQHAASLVLEAIYLKAKSQQKLGKFAEAANDCKRILDAVEKIFYQGISDFQVDGKLQEIVSHAVELLPELWKQGGCYDEAISAYRRALLSQWNLDNDCCSRIQKSFVVFLLYSGVEASPPSLAVQIDGSYVPKNNLEEAILLLMILIRKCCLGKIKWDPSIMEHLTFALSVCSQTSVLAKQFEDLMPGVYHRIDRWNSLALCHCAAGQNVSALNLLRKSLHKHERPDDLTSLLLAAKICSEDSYLAGEGVGHAQRAIKNAHGPNEHLKGVALRMLGLCLGKQAKVASSDFERSRLQSKALESLEEATRLEKNNSDLIFELAVQYAEHRNLTAALRSARHFFNETGGSIVKAWILLALILSAQQRFPEAEVVTDAALDQTVKWEQGPLLKLKAKLKISQSKSMDAIETYRYLLALVQAQRKSFGSFQISSKVEDDKVNEFDIWHGLANLYASLSHWKDAEICLQKARELKEYSAEILRTEGILFEGRGQNQEALNATINAILLEPNHVPSKILMSALIHKMGSKALPAARSMLSDALRIEPTNRVAWYYLGLIHKHDGRMGDAADCFQAASMLEEFDPIESFSTVL* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0575 695 Gene3D Tetratricopeptide repeat domain 23 214 IPR011990 GO:0005515
Mal6g0575 695 ProSiteProfiles TPR repeat profile. 583 616 IPR019734 GO:0005515
Mal6g0575 695 PANTHER PROTEIN NPG1 2 694 IPR043376 -
Mal6g0575 695 PANTHER CALMODULIN-BINDING PROTEIN 2 694 - -
Mal6g0575 695 SUPERFAMILY TPR-like 119 444 IPR011990 GO:0005515
Mal6g0575 695 Gene3D Tetratricopeptide repeat domain 457 688 IPR011990 GO:0005515
Mal6g0575 695 Gene3D Tetratricopeptide repeat domain 286 452 IPR011990 GO:0005515
Mal6g0575 695 Coils Coil 402 422 - -
Mal6g0575 695 SMART tpr_5 119 152 IPR019734 GO:0005515
Mal6g0575 695 SMART tpr_5 583 616 IPR019734 GO:0005515
Mal6g0575 695 SMART tpr_5 549 582 IPR019734 GO:0005515
Mal6g0575 695 SMART tpr_5 459 492 IPR019734 GO:0005515
Mal6g0575 695 SMART tpr_5 653 686 IPR019734 GO:0005515
Mal6g0575 695 SMART tpr_5 303 336 IPR019734 GO:0005515
Mal6g0575 695 SUPERFAMILY TPR-like 497 680 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0575 Mal-Chr6 7589091 7593187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0575 12 695 Calmodulin-binding Proteins AT2G43040 71.366 0.0 966
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0575 K21843 - gmx:100814609 1172.15