Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0567 ATGGAAAATCATGGTGGTGATAATCCTTTATCCGACAACGTTGGTGCCTTACTTATTGCCATGAGTTCAGTAGTATTTGTTATCTCAATGTACAATGTCATAGTCATTTGTTTTTGCCAAACACAACGCACCACCAACCAACCGTGGCACGCCGCAGCACCGAGGTGCGGAAAAAGCACATCCACGTCAATAGCGAACCTTATTCCAACACACAAGTTCCACAAGAGTAATAATGTTGGCGTTGTTTCGGATGAGGGCGGCATGTGTGCCGTTTGTTTGGGAGATTTTGAGGAGGGTGAGGAGTTGAGGACTATGCCTGAATGCTTTCATTCTTTTCATGTACCATGTATTGACATGTGGTTTCATTCACATTTGAGTTGTCCCATTTGCCGCACAAGTGTCGTCCCTTCGTCAGCTGTGGACGGGCAGCATCACATGATAGATATGAGTGATATGACTCCTCCGATTGCTATCGCGCAAAGTGGATTTGTACGATTGTGA 501 0.4531 MENHGGDNPLSDNVGALLIAMSSVVFVISMYNVIVICFCQTQRTTNQPWHAAAPRCGKSTSTSIANLIPTHKFHKSNNVGVVSDEGGMCAVCLGDFEEGEELRTMPECFHSFHVPCIDMWFHSHLSCPICRTSVVPSSAVDGQHHMIDMSDMTPPIAIAQSGFVRL* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0567 166 SUPERFAMILY RING/U-box 82 137 - -
Mal6g0567 166 PANTHER CHROMATIN REGULATOR PHD FAMILY-RELATED 3 165 - -
Mal6g0567 166 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 138 IPR013083 -
Mal6g0567 166 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 3 165 IPR044675 -
Mal6g0567 166 SMART ring_2 89 130 IPR001841 -
Mal6g0567 166 Pfam Ring finger domain 88 131 IPR001841 -
Mal6g0567 166 ProSiteProfiles Zinc finger RING-type profile. 89 131 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0567 Mal-Chr6 7520067 7520567 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0567 24 149 C3H Transcription Factor Family AT4G10150 28.169 6.24e-21 84.0