Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0562 ATGTCCCTCCTCAGCAGATTCTTCTACAAAAGACCCCCAGATGGTTTACTCGAATTCATCGACAGAGTTTACGTTTTCGATTCGTGTTTCTCCACAGAAGCATTACCAGACGGAATGTACCAGCTATATCTTCACGAAATCGTGACAGAATTACACGAAGAGTTTCCAGAATCTTCATTTCTAGCCATTAATTTTCGCGACGGCGAAAAGCGTAGCAATTTCGCTGAATTAATGTGTGATTATGATGTTATTGTTATGGATTATCCAAAAAACTATGAGGGTTGTCCTCTTTTGCCACTTTCACTTGTTCAGCATTTTCTTCGAGTTTGTGAAAGTTGGCTTTTGCTTGGTAACCATCAAAACGTGATTTTGTTTCATTGTGAAAGAGGGGGTTGGCCACTTTTGGCTTTTTTGTTGGCAAGTTTGTTGATTTTTAGAAGGGTTCATAGTGGTGAACGTAGGACACTTGAAATGGTTCATAGAGAAGCACCCAAGGGTTTGTTGCAGTTGTTGTCACCTTTGAATCCACAACCTTCGCAGCTTCGGTATATTCAGTATGTCGCGAGGAGGAACATTGCTCCGGAGTGGCCTCCGCCTGAGAGAGCTTTGTCTTTGGATTGTGTTATTCTTAGGGGGATTCCTAGTTTTGATTCGTCTAATGGATGTAGGCCGATGTTTAGGATTTTCGGGAGGAATTTGCTTAGTAGAGGTGGACTTTCTACTCAGATGATTTATAATATGCATAAGAAGAAGAAGCATTTGAGGCATTATTGTCAGGTAGACTGTGATGTGATTAAGATTGATATTCAATGTTTAGTGCAAGGAGATGTGGTTTTGGAGTGTGTCCATTTGGATTTGGATCTGGAAAGGGAAGTGATGATGTTTCGTGTGATGTTCAATACGGCGTTTATTCGGTCCAATATACTGATGCTGAACACTGAAAACTTGGACATTCTTTGGGATTCGAAGGAGCGGTATCCGAAAGGCTTTCGGGCTGAGGTTTTATTTGGAGAGGTTGAAAACATAAGTCCTCAGAGAGCTTCGACAGAAACAGCCATTTTGAATGGTGAGGAGAAAGGTGGATTACCTATTGAAGCATTTTCAAGAGTTCAAGAACTTTTTAGTGGAGTGGAATGGGTTGACAGTGGTGATGCTGCAGCAGTGTGGCTGCTTAGACAGCTTACTGTCTTAAATGATGCCAAAGAGTTTTCGAGGTTGCAAGGTAAAGGAAGTTGGTTTTCGTCACCAGCTGACTCTGAAGAAGAAAATAATGGATCAAGTGTTGCTGATAGTTCAGATGAGGCCTTTGATGTTACTCCCAAATCTTCTGCCGTTCCTTCAAAATTATTTACATCTGACACACCTCATTTGGATCATATAGCTTTTGAAAACAATGTTGGAAATTGTGTAAATCTCACTTCTAAAATGCCTGATAATGTTTCATCACCTCATCATTCTGCTGGTTCCCCTCTAGGTTGTAACACTGATGATGCTGTTGGTCCACCTCAACCCCCTCCCCCTCACATGGCCAACAATGCTAGCAATGCTTCCACATCTCCTTCATCTCCTCCACCAGGACCTGTACAGACAAGTTCAGTCCCATTACCTCCACCCCCACCACCTCCTCCAGGATTTGCTCGAACAGGTTCAGCCCCACCACCTCCACCTCCACCTCCTCCATGTCCTACACAAATAGGTTTAACCCCACCGCCACCACCTCCTCCTCGTCCAGTTCCATTACGAACAGGTTCAGCCCCGCCACCTCCACCACCTCCTCCAGTTCCGCTGCGAACAAGTTCAGCCCCGCCACCTCCACCACCTCTTCCTGGTTCTACACTAACAGGATCAGCCCCACCACCTCCACCCCCACCGCCTCCAGGCTCTACACAAACCGCGTCAACCCTACCACCTCCGCCACCACCTCCAGGTTCTACACGAACTGGTTCAGCCCCACCACCTCCACCACCACCTCCAGGTTCTACACGAACAGGTTCAGCCCCACCACCTCCTCCAGGTTCTACACGAACAGGATCAGGCCCACCACCTCCACCGCCTCCTCCTGGTCCTCCGCGATCAGGTTCAGACCCACCACCTCCACCACCATCAGGTCCTGTTCGAGCGGGTTCAGCCCCACCACCTCCACCTCCTCCAGGATCTGGACGAACAGGTTCAGCTCCGCCAGCACCTCAGCCTCCCAATGCTCCTCCACCACCTGGCCGTGGCTCGTCAACGGCACCTCCACTTACTGCAGGCAGAGCCCCTAGCGTGCCTCCACCGCCAGGCAAAGCTTCTTTAGCAACAACAAATCTGGGAAAAGGTCGTGGTACTGGTACGACTGGTATTGCTGTTAAAAAAACTTTGTTAAAGCCTCTGCATTGGGTGAAAGTTTCTCGAGCAGTACAAGGGAGTCTATGGGCTGATTCACAGAAACAAGACAGTGATTCAAGGGCCCCTGCCATAGACATATCAGAACTTGAGACCCTGTTTTCAGCAGCATCTATTTCTGACGGAAATAGTACTAAAGGTGGAATTCGGCGTGGTCCTAATATTAACAAACCTGAGAAAGTACAATTGGTTGACTTGCGTAGAGCATATAATTGTGAAATAATGCTCTCTAAAATCAAAATTCCTTTGCCAGATATGCTTAACGCAGTTTTGGCATTGGATTCTTGTGTTCTGGATATTGATCAGGTTGAGAATCTCATCAAGTTCTGTCCCACAAAGGAAGAGATGGAGATACTGAAGAACTATACTGGAAACAAGGATATGCTTGGGAAGTGTGAGCAGTTCTTCATGGAGCTGATGAAGGTTCCACGAATAGAATCCAAGTTAAGGGTGTTTGCTTTTAAAATCACCTTTTCTGGTCAGGTGAGCGATTTAAGGAAAAATTTGAATACAATCAATGATGCAACCAGAGAGGTCAAAGAATCGGTAAAATTGCGTCAAATAATGCAGACTATTCTTACGTTGGGCAATGCTTTGAATCAGGGAACAGCACGAGGTTCAGCAGTAGGATTCAAATTGGACAGCCTTCTCAAATTATCTGATACCCGTGCAAGAAATAACAAAATGACTTTAATGCATTATTTGTGTAAGCTTCTTGCTGAAAAAATGCCAGAATTGATAGATTTTGACAAGGATCTTGTCCATCTGGAAGCTGCTTCTAAGATCCAACTAAAAGCATTAGCTGAAGAAATGCAAGCTGTGCATAAAGGTTTAGAGAAAGTTGAGCAAGAACTCACTGCTTCTGAAAATGATGGTTCTATATCTTCAGGATTTCGCAAGGTGTTGAAGAATTTTCTTGACTTTGCCGAAGCTGACGTGAGGTCACTTATATCGTTGTATGCGGATGTGGGAAGAAATGCCGATTCTTTGTCCAAATACTTTGGGGAGGATCCAGCCAGGTGCCCCTTTGAACAAGTGACACAAATACTTGTTGTCTTTGTAAAGACCTTCAACAAGTCAAGGGAGGAGAATGAAAGGCTAGCAGATGCTGAGAAAAAGAAATTAGAGAAAGAAGCCATGAAGGAAAAGACAGCAAATAACACACATTCTAGAAAAGATATTGTTCGATAG 3576 0.4497 MSLLSRFFYKRPPDGLLEFIDRVYVFDSCFSTEALPDGMYQLYLHEIVTELHEEFPESSFLAINFRDGEKRSNFAELMCDYDVIVMDYPKNYEGCPLLPLSLVQHFLRVCESWLLLGNHQNVILFHCERGGWPLLAFLLASLLIFRRVHSGERRTLEMVHREAPKGLLQLLSPLNPQPSQLRYIQYVARRNIAPEWPPPERALSLDCVILRGIPSFDSSNGCRPMFRIFGRNLLSRGGLSTQMIYNMHKKKKHLRHYCQVDCDVIKIDIQCLVQGDVVLECVHLDLDLEREVMMFRVMFNTAFIRSNILMLNTENLDILWDSKERYPKGFRAEVLFGEVENISPQRASTETAILNGEEKGGLPIEAFSRVQELFSGVEWVDSGDAAAVWLLRQLTVLNDAKEFSRLQGKGSWFSSPADSEEENNGSSVADSSDEAFDVTPKSSAVPSKLFTSDTPHLDHIAFENNVGNCVNLTSKMPDNVSSPHHSAGSPLGCNTDDAVGPPQPPPPHMANNASNASTSPSSPPPGPVQTSSVPLPPPPPPPPGFARTGSAPPPPPPPPPCPTQIGLTPPPPPPPRPVPLRTGSAPPPPPPPPVPLRTSSAPPPPPPLPGSTLTGSAPPPPPPPPPGSTQTASTLPPPPPPPGSTRTGSAPPPPPPPPGSTRTGSAPPPPPGSTRTGSGPPPPPPPPGPPRSGSDPPPPPPSGPVRAGSAPPPPPPPGSGRTGSAPPAPQPPNAPPPPGRGSSTAPPLTAGRAPSVPPPPGKASLATTNLGKGRGTGTTGIAVKKTLLKPLHWVKVSRAVQGSLWADSQKQDSDSRAPAIDISELETLFSAASISDGNSTKGGIRRGPNINKPEKVQLVDLRRAYNCEIMLSKIKIPLPDMLNAVLALDSCVLDIDQVENLIKFCPTKEEMEILKNYTGNKDMLGKCEQFFMELMKVPRIESKLRVFAFKITFSGQVSDLRKNLNTINDATREVKESVKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELIDFDKDLVHLEAASKIQLKALAEEMQAVHKGLEKVEQELTASENDGSISSGFRKVLKNFLDFAEADVRSLISLYADVGRNADSLSKYFGEDPARCPFEQVTQILVVFVKTFNKSREENERLADAEKKKLEKEAMKEKTANNTHSRKDIVR* 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0562 1191 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 339 IPR035892 -
Mal6g0562 1191 Coils Coil 1059 1079 - -
Mal6g0562 1191 Coils Coil 1153 1182 - -
Mal6g0562 1191 Gene3D - 197 342 - -
Mal6g0562 1191 SUPERFAMILY Formin homology 2 domain (FH2 domain) 853 1182 - -
Mal6g0562 1191 MobiDBLite consensus disorder prediction 409 447 - -
Mal6g0562 1191 SMART it6_source 466 1188 IPR015425 -
Mal6g0562 1191 Pfam Formin Homology 2 Domain 784 1152 IPR015425 -
Mal6g0562 1191 MobiDBLite consensus disorder prediction 1160 1191 - -
Mal6g0562 1191 MobiDBLite consensus disorder prediction 520 743 - -
Mal6g0562 1191 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Mal6g0562 1191 ProSiteProfiles Formin homology-2 (FH2) domain profile. 778 1178 IPR015425 -
Mal6g0562 1191 MobiDBLite consensus disorder prediction 477 777 - -
Mal6g0562 1191 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Mal6g0562 1191 SMART PTEN_C2_2 198 338 IPR014020 -
Mal6g0562 1191 PANTHER FORMIN-J 1 1183 - -
Mal6g0562 1191 Gene3D Formin, FH2 domain 780 1163 IPR042201 -
Mal6g0562 1191 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 187 IPR029021 -
Mal6g0562 1191 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0562 Mal-Chr6 7446666 7454467 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0562 1 441 FH2 protein (formin) Gene Family AT1G31810 75.737 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0562 - - mtr:MTR_5g026645 996.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0562 6 7446666 7454467 Mal6g0562 6 7446666 7454467 ECH