Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0554 ATGTACGGCGGAGGAGGAGGAGATGATGCTCTGGCCGCACGCCTCGGGATAGTACCACCGTCGCTACTGATTCCAACATCGTCGTTGATGTCTCCGACGGCGGGGAGAGAGGAGAGGGTTCCAGCTCAGCCGCAGTGGAGTCAGCAGGAGACGAGAGAGTTCATAGCGATACGTGCGGAGCTGGAGAGGGATTTTACTGCTTCGAAGAGGAATAAGACGCTTTGGGAAGTGGTGAGTTCGAAGATGAGGGAGAAAGGGTTTAGAAGGAGTCCTGAACAATGTAAATGCAAGTGGAAGAATCTTGTTAATCGTTATAAGGGAAAAGAAACATCTGATCCAGAGCATGGCAAGCAATGCCCATTTTTTGAAGAATTGCATGCAGTTTTTACCGAAAGAGCACATAACATGCAACGGTTACTTCTTGAATCTGAAACTCGTTCAGCTCAAACAAAGAAAGGAGTGAAAAGAATAAGTGGAGACCGATCCTCAGAGGAATTCTCAGAAGATGATGAGGAAGTTGAAGGCGACAGTGAAGAGGAGAGACCTGCGAGAAGCAATACCCGTAAAAGGAAAGCTGGCAAAATTGCAGTGGAGAAGTCTTCAAAGGCAAACAATGCAAGCATTAGTACTAGTAATATTCAAGAAATGCTCAAGGAATTTTTCCAGCACCAACTAAAGATGGAGATGCAGTGGAGGGAGGTGATGGAAAGGCGTGCACATGAAAGACAGTTGTTTGAACAAGAATGGCGACAATCAATGGAAAAGCTTGAGAGGGAGAGATTGATGATTGAACAGGAATGGAGGGGGAGAGAAGAGCAGAGGAGACTGAGGGAAGATAGTAGGGCAGAGAGAAGGGATGCTTTGTTGACGACCCTTTTAAACAAACTCATTCATGAATCTAACTAA 906 0.4603 MYGGGGGDDALAARLGIVPPSLLIPTSSLMSPTAGREERVPAQPQWSQQETREFIAIRAELERDFTASKRNKTLWEVVSSKMREKGFRRSPEQCKCKWKNLVNRYKGKETSDPEHGKQCPFFEELHAVFTERAHNMQRLLLESETRSAQTKKGVKRISGDRSSEEFSEDDEEVEGDSEEERPARSNTRKRKAGKIAVEKSSKANNASISTSNIQEMLKEFFQHQLKMEMQWREVMERRAHERQLFEQEWRQSMEKLERERLMIEQEWRGREEQRRLREDSRAERRDALLTTLLNKLIHESN* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0554 301 Coils Coil 246 266 - -
Mal6g0554 301 CDD GT1 44 109 - -
Mal6g0554 301 SMART sant 42 104 IPR001005 -
Mal6g0554 301 MobiDBLite consensus disorder prediction 148 163 - -
Mal6g0554 301 MobiDBLite consensus disorder prediction 141 207 - -
Mal6g0554 301 ProSiteProfiles Myb-like domain profile. 46 102 IPR001005 -
Mal6g0554 301 PANTHER - 35 299 - -
Mal6g0554 301 PANTHER - 35 299 - -
Mal6g0554 301 MobiDBLite consensus disorder prediction 178 197 - -
Mal6g0554 301 Pfam Myb/SANT-like DNA-binding domain 44 127 IPR044822 -
Mal6g0554 301 Gene3D - 46 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0554 Mal-Chr6 7360549 7362670 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0554 44 301 Trihelix Transcription Factor Family AT2G38250 45.420 6.73e-50 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mal6g0554 Myb_DNA-bind_4 2.5e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0554 - - gmx:100812635 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0554 6 7360549 7362670 Mal6g0554 6 7360549 7362670 ECH