Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0550 ATGGACATTTGTCTTATAAAAGGCCAATGGCTGTGGCTTCTGTATGTTTTGTTGGTACATATTGTAATTAATAACATTGAAGCGATCACTCCTGATGGCGAGGCACTCATCAACTTCAGGACAACAATTGGTAGCTCTGACGGTATCCTGTTACAATGGAGGCCTGAGGATCCTGACCCATGTAAATGGAAAGGAGTGAAATGTGATCCAAAAACCAAGAGAGTGACACATCTGATTCTATCACACCATAAGTTAATTGGGTCTTTATCACCTGACCTTGGAAAGTTAGAGCGTCTGAAAGTTCTTGCTCTTCATAACAACAACCTCTATGAAAAAATTCCACCAGAATTGGGAAATTGCACTGAATTGCAGTCAATCTTTTTACAGGGTAATTACCTTAGTGGAATGATTCCAAGTGAATTAGGAAATCTCTCACAGCTTCAGAATTTGGATATATCAAGCAATTCCCTTGGTGGGAATATTCCAGCATCAATTGGAAAGTTGTATAATCTAAAAAACTTCAATGTATCAACCAATTTTCTGGTTGGACCAATACCTTCTGATGGTGTTCTTTCCCACTTTACTGGTAGCTCGTTTGTTGGAAACCGTGGTTTGTGTGGAGTGCAAATCGATTCAACATGTAAAGATGATGGTTCACCTGGGAATAGTTCTCCTTCAGACCAAAATCCAAATGGAAAGAAGAATTCTGGCCGACTTCTCATCAGCGCATCAGCAACTGTGGGCGCACTACTTTTGGTGGCACTTATGTGCTTCTGGGGTTGTTTTCTTTATAAAAAGTTTGGTAAAAATGATAGAATAAGTCTTGCAGTGGATGTTGGTCCAGGTGCCTCAATAGTGATGTTTCATGGAGACCTACCATATTCTTCGAAAGACATTATTAAGAAACTAGAGACTTTGAATGAGGAACACATAATAGGAGTAGGGGGATTTGGAACTGTTTACAAGCTTGCAATGGATGATGGGAATGTATTTGCGTTGAAAAAGATCGTAAAGTTGAATGAGGGCTTTGATCGTTTTTTTGAGAGGGAGCTTGCAATTCTTGGTAGCATCAAACACCGTTATTTAGTTAACTTACGTGGATATTGTAATTCACCTACGTCAAAGTTGTTAATATATGACTACCTACCTGGTGGTAGTCTTGATGAAGTTCTTCATGAAAGATCTGAGCAACTAGACTGGGATTCACGGTTGAATATAATCATGGGAGCTGCAAAAGGGCTTGCTTACTTGCACCACGATTGTTCCCCTAGGATCATACACCGAGACATAAAATCGAGCAACATTTTGCTTGATGGAAAATTGGATGCTCGAGTTTCTGATTTTGGACTTGCCAAACTTCTGGAGGATGAAGAATCTCACATCACTACTATTGTTGCCGGAACATTCGGTTATCTAGCTCCAGAGTATATGCAAAGTGGCAGAGCAACTGAGAAGACTGATGTTTATAGTTTTGGGGTGTTGACACTTGAAGTGCTTAGTGGAAAGCGGCCAACAGATGCATCCTTCATTGAAAAGGGTCTCAATATTGTTGGTTGGTTGAATTTCCTTATTACTGAAAATAGGCCGAGGGAAATTGTCGATTCACTATGCGACGGGGTGCAGGTGGAGAGCCTTGATGCTTTGCTCTCTATGGCTATTCCGTGTGTTTCCTCAAGTCCAGAGGATCGACCCACTATGCATCGAGTGGTCCAGTTGCTTGAATCGGAGGTCGTAACTCCATGCCCAAGTGACTTCTATGATTCAAACTCCGACTAG 1776 0.411 MDICLIKGQWLWLLYVLLVHIVINNIEAITPDGEALINFRTTIGSSDGILLQWRPEDPDPCKWKGVKCDPKTKRVTHLILSHHKLIGSLSPDLGKLERLKVLALHNNNLYEKIPPELGNCTELQSIFLQGNYLSGMIPSELGNLSQLQNLDISSNSLGGNIPASIGKLYNLKNFNVSTNFLVGPIPSDGVLSHFTGSSFVGNRGLCGVQIDSTCKDDGSPGNSSPSDQNPNGKKNSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNDRISLAVDVGPGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGVGGFGTVYKLAMDDGNVFALKKIVKLNEGFDRFFERELAILGSIKHRYLVNLRGYCNSPTSKLLIYDYLPGGSLDEVLHERSEQLDWDSRLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGKLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLTLEVLSGKRPTDASFIEKGLNIVGWLNFLITENRPREIVDSLCDGVQVESLDALLSMAIPCVSSSPEDRPTMHRVVQLLESEVVTPCPSDFYDSNSD* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0550 591 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Mal6g0550 591 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FEI 1 3 591 IPR031071 GO:0004672|GO:0005524|GO:0030244
Mal6g0550 591 SUPERFAMILY Protein kinase-like (PK-like) 289 573 IPR011009 -
Mal6g0550 591 SMART serkin_6 306 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0550 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Mal6g0550 591 Gene3D Phosphorylase Kinase; domain 1 283 381 - -
Mal6g0550 591 Pfam Protein kinase domain 308 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0550 591 PANTHER RECEPTOR-LIKE PROTEIN 55 3 591 - -
Mal6g0550 591 ProSitePatterns Protein kinases ATP-binding region signature. 312 334 IPR017441 GO:0005524
Mal6g0550 591 MobiDBLite consensus disorder prediction 216 235 - -
Mal6g0550 591 SUPERFAMILY L domain-like 31 195 - -
Mal6g0550 591 Gene3D Ribonuclease Inhibitor 30 215 IPR032675 -
Mal6g0550 591 ProSiteProfiles Protein kinase domain profile. 306 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0550 591 Gene3D Transferase(Phosphotransferase) domain 1 382 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0550 Mal-Chr6 7293083 7301906 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0550 1 582 Receptor kinase-like Gene Family AT2G35620 75.129 0.0 874
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Mal6g0550 Pkinase 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0550 - - gmx:100819230 1059.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0550 6 7293083 7301906 Mal6g0550 6 7293083 7301906 ECH