Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0546 ATGGTGAAGGAGAGCGAGTACTATGACGTGCTGGGTGTCAGTCCAACCGCATCCGAAGCTGAGATCAAGAAAGCTTATTACATCAAGGCAAGGCAAGTTCATCCGGATAAAAACCCAAATGACCCTCTTGCTGCTCAGAATTTTCAGGTTTTAGGTGAGGCTTACCAAGTTCTCAGTGACCCATCTCAAAGGCAAGCTTATGATGCACACGGCAAATCAGGAATCTCAACTGATGCCATTATTGATCCTGCAGCAATCTTTGCCATGCTTTTTGGTAGTGAGCTTTTTGAAGAATATATAGGCCAATTAGCCATGGCATCAATGGCTTCCATGGACATTTTTACCGAAGGAGAACAATTTGATACTAAAAAGTTGCAAGACAAAATGCGGGTTGTTCAGAAGGAGAGAGAAGAAAGGCTTGTAGAGATACTGAAAGGTAGACTCAACCAGTATGTCCAGGGAAACAAAGAAGACTTTGTTAATCATGCAGAAGCTGAAGTAGCCCGGCTGTCCAATGCAGCTTATGGGGTTGATATGTTGAATACCATTGGCTACATATACGCAAGGCAGGCTGCAAAAGAGCTAGGGAAGAAAGCAATTTATTTGGGTGTGCCTTTTATTGCTGAGTGGTTTAGAAACAAAGGACACTTCATCAAATCCCAAGTTACAGCGGCAACAGGGGCAATTGCATTGATCCAACTGCAGGAGGATATGAAGAAACAACTCAGTTCAGAAGGGAACTACACTGAAGAAGAGCTTGAAGAATACATGCAATCTCATAAGAAATTAATGATTGACTCTCTGTGGAAGCTTAATGTGGCTGACATTGAGGCCACTCTTTCCCGTGTCTGTCAAATGGTTCTTCAAGACAGCAGTGCCAAGAAAGAAGAACTACGTGCACGAGCAAAAGGGTTGAAAACTCTTGGTAAAATCTTCCAGATGGTTAAGACAGCCAATGGTAATGAGAACGAAAATTTACAAAACAAAGCCGTACATAAATTGAATGGAAGTGAAACTAGCAATGATGTTTGTTCTCCTAGTGCATCACCCAAATCTTCAAGTCCTGGTTTTCCAACCCATGCTGTCGCATCGCAGAGCCCCTATGTGGAGGCCCCACACTTTGCAGGCATGCAATTTGACTACAACTTCCCTAGGCCAACCGCCCCCCCAGGTGCCCACAGACCTGCTCCAACCAGCAAGGATTGA 1206 0.4411 MVKESEYYDVLGVSPTASEAEIKKAYYIKARQVHPDKNPNDPLAAQNFQVLGEAYQVLSDPSQRQAYDAHGKSGISTDAIIDPAAIFAMLFGSELFEEYIGQLAMASMASMDIFTEGEQFDTKKLQDKMRVVQKEREERLVEILKGRLNQYVQGNKEDFVNHAEAEVARLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSSEGNYTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDSSAKKEELRARAKGLKTLGKIFQMVKTANGNENENLQNKAVHKLNGSETSNDVCSPSASPKSSSPGFPTHAVASQSPYVEAPHFAGMQFDYNFPRPTAPPGAHRPAPTSKD* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0546 401 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Mal6g0546 401 CDD DnaJ 6 60 IPR001623 -
Mal6g0546 401 Gene3D DnaJ domain 1 83 IPR036869 -
Mal6g0546 401 Pfam X-domain of DnaJ-containing 133 324 IPR026894 -
Mal6g0546 401 Pfam DnaJ domain 6 68 IPR001623 -
Mal6g0546 401 MobiDBLite consensus disorder prediction 335 364 - -
Mal6g0546 401 MobiDBLite consensus disorder prediction 379 401 - -
Mal6g0546 401 SUPERFAMILY Chaperone J-domain 2 101 IPR036869 -
Mal6g0546 401 PRINTS DnaJ domain signature 26 41 IPR001623 -
Mal6g0546 401 PRINTS DnaJ domain signature 63 82 IPR001623 -
Mal6g0546 401 PRINTS DnaJ domain signature 8 26 IPR001623 -
Mal6g0546 401 PRINTS DnaJ domain signature 43 63 IPR001623 -
Mal6g0546 401 PANTHER CHAPERONE PROTEIN DNAJ 10-LIKE ISOFORM X1 1 354 - -
Mal6g0546 401 SMART dnaj_3 5 63 IPR001623 -
Mal6g0546 401 MobiDBLite consensus disorder prediction 335 361 - -
Mal6g0546 401 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 354 - -
Mal6g0546 401 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Mal6g0546 401 Coils Coil 288 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0546 Mal-Chr6 7021045 7030258 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0546 7 70 C2H2 Transcription Factor Family AT1G74250 43.478 1.06e-08 55.1