Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0527 ATGGGAATGGATCAAGATAACCAATACAAACGGCGTGCGACTCATCCTAGTCCGGACTCACAGGAGACAAAGAAGCGGGCAGTAGTCACAACGATCCATGAAGATTGCAATAAGCTCTCTTCTTGTTGTTCCATCTACAAACATCTTCATGCCTTGGAGATGGATGTTAATAAGAGGCCATCCGGCAATTATGCCGAAACGGTTCAAAGAGAGGTGACATACCACCAGATGCGTGAGATTCTTGTTGATTGGTTAGTGGAGGTTGTCGAAGAACTCAAGCTAACTTCGGATACCTTATATCTCGCTGTTTCTTGCATTGATCGTTTCCTCTCTATCCGTCACCTCAACAGGAATCACCTTCAGCTTCTCGGCGTTTCCTCCATCCTCATTGCCTCGAAACAAGGAGATATATGTCCTCCACACGCACAACAGTTGTGTTTTATGACAGATAATACTTACACTGTCTCAGAGGTTATAGAGATGGAGACACAGATCCTCACAACTTTGAACTCCCACTTGGCATATCCCTTCTCTAAAACTTTTCTCAGAATTTTTATGGGAGCTATTCAGACAGTTTTCCAGTATTCCTACCAGCCATTGGAATTCTTGGCTTGTTATCTTCTGGAGCTATGCCTATTATCTTCTAAGTGCATCAAGTTCTTACCCTCTGTAGCTGCTGCATCCGCTTTATTCTTATCAAGGTTTATAATTCAACCAAACCACCACCCTTGGAATTCAGTGTTACAATGCCAAACAGGATATAAGCCACGTGAGCTGCAGGAATGTGTCCTAGCCATACATGCTTTGCATTCCACTATCACAGTGTGCCCTTTACAAGCAATACGGCAAAAATACTTGCAACCCAAGTTTACCTGCGTGGCATCTTTGACTGCTGGGGAAATTCCTTCAAGTTATTTTGAGGGAGCAAATGATTGA 936 0.4338 MGMDQDNQYKRRATHPSPDSQETKKRAVVTTIHEDCNKLSSCCSIYKHLHALEMDVNKRPSGNYAETVQREVTYHQMREILVDWLVEVVEELKLTSDTLYLAVSCIDRFLSIRHLNRNHLQLLGVSSILIASKQGDICPPHAQQLCFMTDNTYTVSEVIEMETQILTTLNSHLAYPFSKTFLRIFMGAIQTVFQYSYQPLEFLACYLLELCLLSSKCIKFLPSVAAASALFLSRFIIQPNHHPWNSVLQCQTGYKPRELQECVLAIHALHSTITVCPLQAIRQKYLQPKFTCVASLTAGEIPSSYFEGAND* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0527 311 SUPERFAMILY Cyclin-like 175 297 IPR036915 -
Mal6g0527 311 SMART cyclin_7 83 167 IPR013763 -
Mal6g0527 311 SMART cyclin_7 184 268 IPR013763 -
Mal6g0527 311 Pfam Cyclin, N-terminal domain 45 173 IPR006671 -
Mal6g0527 311 SMART Cyclin_C_2 176 304 IPR004367 -
Mal6g0527 311 Pfam Cyclin, C-terminal domain 178 297 IPR004367 -
Mal6g0527 311 PANTHER CYCLIN-A3-1-LIKE 18 308 - -
Mal6g0527 311 CDD CYCLIN 185 267 IPR013763 -
Mal6g0527 311 PANTHER CYCLINS 18 308 IPR039361 -
Mal6g0527 311 ProSitePatterns Cyclins signature. 78 109 IPR006671 -
Mal6g0527 311 CDD CYCLIN 77 166 IPR013763 -
Mal6g0527 311 SUPERFAMILY Cyclin-like 49 170 IPR036915 -
Mal6g0527 311 Gene3D - 45 295 - -
Mal6g0527 311 Gene3D - 60 174 - -
Mal6g0527 311 MobiDBLite consensus disorder prediction 1 26 - -
Mal6g0527 311 MobiDBLite consensus disorder prediction 8 26 - -
Mal6g0527 311 PIRSF Cyclin_A_B_D_E 3 305 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0527 Mal-Chr6 6684844 6686762 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0527 44 310 Core Cell Cycle Gene Families AT5G43080 51.119 7.15e-87 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0527 K06627 - tcc:18608037 266.544