Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0490 ATGGCTACCCCAAAATACAACTACGTTGCATTACTCCTTTACTCCATGTGTGTTTGTGTGATCATGTTGAAAACAAAAGCAGTAGAAGCAACGCCAACTTACACAGCCACTCACTGCACAAACACAACCACTTACGCACCAAACTCCACTTTTGAAACCAATCTCAAAATCCTCCTCTACTATTTCTCCAATAATATCTCTCAATCCAACGGTTATTTTCTCAGTATCACCGGTTTCAATTCAGTCAACGCTGTTGGAGGACTCTTCCTCTGCCGCGGCGACGTCACCACAACCATCTGCAACCAGTGTCTCACCGCCGCAGTCCCAAAAATAACACAACATTGTCCAAACCAAACAGAAGCACTCATATGGTACGATGAGTGCTTCGTCCGTTTCACAAACAGGTACTTCGCTGTTGACAAGATTGTCCCTAGAGTCAACCTCGACGATGGAAATATTGTCTCCGGCGTTGACTTGGGGAGATTTAACCAATCGCTGCATGGGTTGCTGGATGGTTTGGTAACGGAAGTGGCGGCGAGTTCTCAAGCGAAGAAGTTCGCCGCCGGTGAAGTTAGGGTGATGGAGTCAATGACGGTGTATGGATTGATGCAGTGCACGAATGACTTAACGAATAGTGAGTGTGAGACGTGTTTGAAAAATGCTATTGGAACTCTTCCTAATGGAAAACAGGGTGCAAGAGCTTTGCTTCCTTCTTGTAATGTTAGATACCAACTCTACCCTTTTTTCACTTTATCTTCACCACCATCTTCAGGGGAAAGGAAACTTGGACCTGGCACAATTGCGGTCGTGGTTGTCGTGCCCATTGCTTTCCTAATTATCTTATTTTTAGGCTGCTACTATTTCAAGAGAAGGTCAAAGAAGAAGAAGATACTCATGCCGAGTACAATGGAAAATTTTGGTGATGAATTTCCAACATTGGAGTCTTTGCAATTCAATTTGGCTACTCTAGAAGCAGCAACTAACCAGTTCTCATTGGAGAATAAGATAGGAAGTGGAGGATTTGGAGAAGTTTACAAGGGGGTTTTGCTAGATGGCCGACAAATAGCCGTAAAAAAACTTTCAAAAAATTCAGGACAAGGCACAATAGAATTTAAAAATGAAATTGTGCTAATAGCCAAACTCCAACATAGAAATTTGGTAACCTTGTATGGATTTTGCTCGGAAGAACAAGAAAAAATGCTTGTTTATGAATACGTACCTAATAAAAGTCTTTATTATTTCTTATTTGATCCTAATAAAGAAAGAGTCTTGAGTTGGCTTGAAAGATATAACATCATAGGTGGAATTGCACGAGGGATTCATTACTTACATGATCAATCAAGACTTAAAGTTATACACCGTGATCTCAAACCTAGCAATATATTGTTAGATAAAAATATGAATCCAAAAATATCAGACTTTGGTATGGCAAAAATGATTGATATAGATGAACATCAAGGAAATACTAAGAGGATTGCCGGAACTTATGGTTATATGTCTTCCGAATATGCAATGCATGGACATTATTCAGAAAAATCAGATGTGTATAGCTTTGGAGTTATAATTATAGAGATAATTAGTTCAAAGCGGAATGCCCTTAGTCTTCATTCACTGGATTTTGATGACCTCTTAAGTTGTGCTTGGAAAAATTGGAGGGATGAAAAGGCGCTAGAAATATTGGATTCTGATATAGAAAAATCATATTCTTATATTGAAGTCATTAGATGCATTCAAATTGGTTTATTATGTGTGCAACAAAATCCAGATGATAGACCAACAATGGAAAGAGTTGTTTCATATCTGAGTAATGTTTCAGTGGAGCTACCATTGCCTCAAGAGCCTGCAGGTTTCATTGGTAATGGAATGAATCCAATACCAAGGGATAATATTTCGGATCAACGTAACAATAGTAATACTACGGGATCCTCAGTCAATGATATGACCATGAACAATTCTTTTCCTCGATAG 1968 0.3908 MATPKYNYVALLLYSMCVCVIMLKTKAVEATPTYTATHCTNTTTYAPNSTFETNLKILLYYFSNNISQSNGYFLSITGFNSVNAVGGLFLCRGDVTTTICNQCLTAAVPKITQHCPNQTEALIWYDECFVRFTNRYFAVDKIVPRVNLDDGNIVSGVDLGRFNQSLHGLLDGLVTEVAASSQAKKFAAGEVRVMESMTVYGLMQCTNDLTNSECETCLKNAIGTLPNGKQGARALLPSCNVRYQLYPFFTLSSPPSSGERKLGPGTIAVVVVVPIAFLIILFLGCYYFKRRSKKKKILMPSTMENFGDEFPTLESLQFNLATLEAATNQFSLENKIGSGGFGEVYKGVLLDGRQIAVKKLSKNSGQGTIEFKNEIVLIAKLQHRNLVTLYGFCSEEQEKMLVYEYVPNKSLYYFLFDPNKERVLSWLERYNIIGGIARGIHYLHDQSRLKVIHRDLKPSNILLDKNMNPKISDFGMAKMIDIDEHQGNTKRIAGTYGYMSSEYAMHGHYSEKSDVYSFGVIIIEIISSKRNALSLHSLDFDDLLSCAWKNWRDEKALEILDSDIEKSYSYIEVIRCIQIGLLCVQQNPDDRPTMERVVSYLSNVSVELPLPQEPAGFIGNGMNPIPRDNISDQRNNSNTTGSSVNDMTMNNSFPR* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0490 655 ProSiteProfiles Gnk2-homologous domain profile. 33 137 IPR002902 -
Mal6g0490 655 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 634 - -
Mal6g0490 655 SMART serkin_6 330 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0490 655 MobiDBLite consensus disorder prediction 621 655 - -
Mal6g0490 655 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 15 634 - -
Mal6g0490 655 ProSiteProfiles Protein kinase domain profile. 330 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0490 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Mal6g0490 655 CDD STKc_IRAK 336 601 - -
Mal6g0490 655 ProSitePatterns Protein kinases ATP-binding region signature. 336 359 IPR017441 GO:0005524
Mal6g0490 655 Pfam Protein kinase domain 331 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0490 655 ProSiteProfiles Gnk2-homologous domain profile. 142 248 IPR002902 -
Mal6g0490 655 Pfam Salt stress response/antifungal 161 245 IPR002902 -
Mal6g0490 655 Pfam Salt stress response/antifungal 39 134 IPR002902 -
Mal6g0490 655 SUPERFAMILY Protein kinase-like (PK-like) 316 615 IPR011009 -
Mal6g0490 655 Gene3D Transferase(Phosphotransferase) domain 1 406 609 - -
Mal6g0490 655 Gene3D - 150 248 IPR038408 -
Mal6g0490 655 Gene3D - 32 137 IPR038408 -
Mal6g0490 655 MobiDBLite consensus disorder prediction 626 655 - -
Mal6g0490 655 Gene3D Phosphorylase Kinase; domain 1 290 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0490 Mal-Chr6 6225809 6229455 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0490 13 655 Receptor kinase-like Gene Family AT4G05200 43.722 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal6g0490 Pkinase 2.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0490 - - cam:101500396 981.474