Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0488 ATGATTACTACTACTACTACCTCAAAACAAATCTGGCCATGGACAACCTCGTACGTAGTTTACACCATATTTGGTTTCTTCTATCTAACCTTAGCAACAGCAACAGAAGCATCTCCAACATACATAGGCACTCACTGCAACAACAACACAACATACACACCAAACAGCACATTATCTACAAACCTTAATGTCCTCCTCAATTCTCTTACAACCAACTCCTCCCAACAACTAAACGGTTATTACATGACCATCATGGGTTTCGGAACAACCAACGCCGTTAACGGAATGTTTCTCTGTCGTGGTGACGTTAACACAACCACTTGTCAAAATTGTGTTATTGACGCGGCTACACAGATCAAACGACGTTGTAAAAATCAAACGGAAGCAGTTATATGGTATGAAGAGTGTTTGCTACGTTACACGAACAAGTTTTTTAGATATTACAGTAGTGAACCTAGGCTAAATCCTAAAAATGGTAAAACGGTTTCTAGTGTTGACTTTGACCGGTTCAATGAAACGGTTTTTGGGTTGTTGAATGAGGTGGTGGTTAAGGCGGCGAATTCACCAACGGCGAAGAAATTTGCTACCGGAGAAGTTGAAGTGAAGAGAAATGTGAAGGTTTATGGGTCTGGACAGTGTAGTACGGATTTAACAAGTGTTCAGTGTGAGACTTGTTTGAGAAATGGCATTGGAACTCTTCCACAGTGTTGTAGTGGACAAGAGGGTGCAAGTGCTCTACTTGCGTCGTGTATTGTTAGATATGAACTCTATCCATTTTATACAATAAGTGGGACACCATCATCTTCTTCAGGAAAAAATGGAGTTGTTGGAACAAAAACAATTGTCATCATTATTGTCCTGGCCTTTCTTCCGGTATTAGTTTTATTTTTAGGCTGCTATTGCAAACGGAGAAGATCAGGACAGAGACGTAGGACAATGCTAAAGGAAAATTTTGGGGATGAACTTAAAACACTAGAGTCATTGCAATTCAACTTTGCTACAATTGAAGCTGCCACCAACAAATTTTCACCTCAGAACGAGATAGGCAAAGGAGGATTTGGTATTGTCTACAAGGGTGTTCTTTCTGATGGACAACAAATAGCAGTAAAGAAACTCTCAAGAAGTTCAGGACAAGGTTCTATAGAATTTCAAAATGAAATTTTACTAATAGCCAAACTTCAACACAGAAATTTGGTGACTTTATTAGGATTCTGCTTGGAAGAACGGGAGAAAATGCTTATATACGAATATGTGCCTAATAAGAGTCTTGATTATTTTCTATTCAATCCTCAAAAGCACAGAGTGTTACATTGGTTTGAGCGTTATAAAATTATAGGAGGAATTGCACGAGGAATTCTTTACTTACATGAGTATTCAAGACTTAAAGTCATACATCGAGATCTCAAACCTAGCAATGTATTGTTAGATGACAATATGAATCCAAAAATATCAGATTTTGGTTTGGCAAGAATAATTGCAATCGATCAAGAACAAGAAAGAACTAACAGAATTGTGGGAACATATGGTTATATGTCTCCAGAATATGCAATGCATGGACAATTTTCTGAGAAATCGGATGTGTTCAGTTTTGGAGTTATAATTCTTGAGATAGTTAGCGGAAAGAGAAATAATCGTCCCATTGAATCACGCGATTTTGAGGACCTCCTAAGAATTGCTTGGAGACAGTGGAGGAATCAAACGCCATTAGAAATGTTGGACCCCATTCTAAAAGACTCGTTTTCTCATAGTGAAGTTATTAAGTGCATTCAGCTAGGTTTATTATGTGTTCAAGAAAATCCAGATGATAGACCTACAATGGCACAAGTTGTTTCATATATCAGTAGTATTTTAGTTGAATTGCCACTTCCTCAAGAGCCAGCATTTTCCATGGATAGAGGAATGAAGTTAAACATACCAACAACAGAGTCTACTTCGGGTCAATTTACTAGTAATTCTATGGCATCCTCAATCAATGACATGACTAAGAGTCAGTTTTTCCCTCGATAG 2007 0.3792 MITTTTTSKQIWPWTTSYVVYTIFGFFYLTLATATEASPTYIGTHCNNNTTYTPNSTLSTNLNVLLNSLTTNSSQQLNGYYMTIMGFGTTNAVNGMFLCRGDVNTTTCQNCVIDAATQIKRRCKNQTEAVIWYEECLLRYTNKFFRYYSSEPRLNPKNGKTVSSVDFDRFNETVFGLLNEVVVKAANSPTAKKFATGEVEVKRNVKVYGSGQCSTDLTSVQCETCLRNGIGTLPQCCSGQEGASALLASCIVRYELYPFYTISGTPSSSSGKNGVVGTKTIVIIIVLAFLPVLVLFLGCYCKRRRSGQRRRTMLKENFGDELKTLESLQFNFATIEAATNKFSPQNEIGKGGFGIVYKGVLSDGQQIAVKKLSRSSGQGSIEFQNEILLIAKLQHRNLVTLLGFCLEEREKMLIYEYVPNKSLDYFLFNPQKHRVLHWFERYKIIGGIARGILYLHEYSRLKVIHRDLKPSNVLLDDNMNPKISDFGLARIIAIDQEQERTNRIVGTYGYMSPEYAMHGQFSEKSDVFSFGVIILEIVSGKRNNRPIESRDFEDLLRIAWRQWRNQTPLEMLDPILKDSFSHSEVIKCIQLGLLCVQENPDDRPTMAQVVSYISSILVELPLPQEPAFSMDRGMKLNIPTTESTSGQFTSNSMASSINDMTKSQFFPR* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0488 668 ProSiteProfiles Protein kinase domain profile. 342 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0488 668 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 25 668 - -
Mal6g0488 668 Gene3D - 39 145 IPR038408 -
Mal6g0488 668 Gene3D - 156 259 IPR038408 -
Mal6g0488 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Mal6g0488 668 Pfam Protein kinase domain 345 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0488 668 Gene3D Transferase(Phosphotransferase) domain 1 418 621 - -
Mal6g0488 668 SMART serkin_6 342 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0488 668 ProSitePatterns Protein kinases ATP-binding region signature. 348 371 IPR017441 GO:0005524
Mal6g0488 668 ProSiteProfiles Gnk2-homologous domain profile. 150 259 IPR002902 -
Mal6g0488 668 SUPERFAMILY Protein kinase-like (PK-like) 328 632 IPR011009 -
Mal6g0488 668 CDD STKc_IRAK 348 616 - -
Mal6g0488 668 Gene3D Phosphorylase Kinase; domain 1 302 417 - -
Mal6g0488 668 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 25 668 - -
Mal6g0488 668 Pfam Salt stress response/antifungal 46 142 IPR002902 -
Mal6g0488 668 Pfam Salt stress response/antifungal 168 257 IPR002902 -
Mal6g0488 668 ProSiteProfiles Gnk2-homologous domain profile. 40 145 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0488 Mal-Chr6 6207594 6211770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0488 26 668 Receptor kinase-like Gene Family AT4G05200 43.478 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal6g0488 Pkinase 1.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0488 - - cam:101500396 1042.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0643 1 7465369 7469503 Mal6g0488 6 6207594 6211770 PCT