Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0487 ATGGACAAAGATAAAATTTCTTCAAATATGATTATGTTAATCATCATTTTAATGTTAAAATCTATACACATTGTTTCTGGTACAGATCATCTTATTATAGATACATATTGTCCAGAAAATTTCCCATTTTACACTTCCAACAGTTCATTCCACAAGAATCTCAAGCTTCTCATGGAAACTCTCTCCTCCAATATAGTTGCTTCAAACACAAGTTTCTTCAACAATACATCAACAGGAGAAGGACTAGACAAAGTGTATGGACAAGCACTATGCAGAGGAGACATAAAAAACTCCACAGTTTGCAAAGAATGCATTGAGAAAGCAAGCAAAGATTTAATGAATAGGTGTAAGAGTGAGGATGCAATGATATGGTATGAACTTTGTCAAGTTCGGTACTCCTTTCAGATGTTTTTTTCAAATGCTGTTTATACCGGAAAATATCCGAAGCAGAATGATCTAGAGAAGCCTGTTTCGGATCCTACTAGTTTCCAACAAGTGTTGAGTTATTTAATGAACAATCTCTCAAATGAGGCTGCTTTTAATCCTTCTAAGAATATGTTTGCAACAGCGGAAATTGAATTTTCTGCGAAGAAGAAAAGAATTTATGGACTTGTCGAATGTACAAAGGACGTTTCTGAAACGGACTGCAGAAGTTGTTTGAGTTCTGCAGTCACAGAACTCAATGCATGCTGCTCATACAGGGAAGGAGGGATTATTGTTAGTCGAAATTGCAACGTTAGGTTCGATCTCTTTCAGTTTTTTAATTCTTCATCAGCATCACCCCTTTTGATTTTCCCAACTTCCAAAGGAGGAAAATGGAAGCCTTGGATGTATGTGTTAACTATATGCGGCTCAATTTCGATATTGGCAGTTCTTATTGGGTTGTGCACCGCTTGCCTCCGGCAGAAAAATGATAGAGACAGAGATGTAGAAAGAAGCGAAAGGACGCTATTACAAGAATTGGCTAGCCCCAAGAATGTAGCAATCACACAAGAAGGTGAGTTGATTAGTTCTGATCAACTGTTGTTCATGACTTTAGCAACCATTAAGGCGGCTACCGGTGACTTTTCTAATACAAATAAGCTTGGACAAGGAGGGTTTGGTGCCGTCTACAAGGGTGTTCTAAAAGACGGTAGTGAAATAGCTGTTAAAAGACTGTCAAGAAAGTCTTGGCAAGGCATAGAGGAATTCAAAAATGAGATCATTCTAATAGCTAAACTTCAACACAGGAATTTGGTTAAATTGTTGGGATGTGTCTTAGAAGGAGAGGAAAAGATACTCATATATGAATTCATGTCAAACAGAAGCCTTGATCAATTTATCTTTGATCCAAACAAACGTCCTAAACTTGATTGGAATACATGTTATGGCATCATCGGCGGTATAGCAAGAGGACTACTTTATCTGCACGAGGAGTCTCGGCTTAAAATCATTCACCGTGACTTAAAGCCGAACAATGTATTGTTAGACCATGAACTAGTAGCCAAAATATCAGATTTTGGTATGGCGAGGATGTTTTCTGAGAATCAGAATACAGCAAACACAAAAAGAGTTGTGGGAACACATGGATATATGGCTCCAGAATATGCAATGGAAGGACTATTCTCCGTGAAATCTGATGTATTCAGCTTCGGCGTAATTATGCTTGAAATCATATGCGGGAAAAGAAATAGCGGCTTTTACTCAACCAAACTTGCCCCGACTTTGCTAGCATATGCTTGGCGGCTATGGAATGAAGGAAAAGGATTAGAAATTGTGGATCCTATATTATTGGAATCATGTCTTGATTATGAATCTGAAGTTCTTAGGTGCATTCATATTGGGCTCTTGTGTGTGCAAGAAGATCCGCAACACAGGCCCACCATGTCAAACGTCGTGGTTCTATTGGGAAGTGAATCATTGGTTCTTCCTCAGCCGAGACAACCAGCATTTTCTTTGGGTAAGATGATTCGTGTGGATCCTTCTACATCAACAAATTGTTCATTGAATGAGAGTATATGGTCTAGTGTTTCACCGCGATGA 2022 0.3858 MDKDKISSNMIMLIIILMLKSIHIVSGTDHLIIDTYCPENFPFYTSNSSFHKNLKLLMETLSSNIVASNTSFFNNTSTGEGLDKVYGQALCRGDIKNSTVCKECIEKASKDLMNRCKSEDAMIWYELCQVRYSFQMFFSNAVYTGKYPKQNDLEKPVSDPTSFQQVLSYLMNNLSNEAAFNPSKNMFATAEIEFSAKKKRIYGLVECTKDVSETDCRSCLSSAVTELNACCSYREGGIIVSRNCNVRFDLFQFFNSSSASPLLIFPTSKGGKWKPWMYVLTICGSISILAVLIGLCTACLRQKNDRDRDVERSERTLLQELASPKNVAITQEGELISSDQLLFMTLATIKAATGDFSNTNKLGQGGFGAVYKGVLKDGSEIAVKRLSRKSWQGIEEFKNEIILIAKLQHRNLVKLLGCVLEGEEKILIYEFMSNRSLDQFIFDPNKRPKLDWNTCYGIIGGIARGLLYLHEESRLKIIHRDLKPNNVLLDHELVAKISDFGMARMFSENQNTANTKRVVGTHGYMAPEYAMEGLFSVKSDVFSFGVIMLEIICGKRNSGFYSTKLAPTLLAYAWRLWNEGKGLEIVDPILLESCLDYESEVLRCIHIGLLCVQEDPQHRPTMSNVVVLLGSESLVLPQPRQPAFSLGKMIRVDPSTSTNCSLNESIWSSVSPR* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0487 673 Pfam Protein tyrosine and serine/threonine kinase 359 627 IPR001245 GO:0004672|GO:0006468
Mal6g0487 673 SMART serkin_6 356 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0487 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Mal6g0487 673 SUPERFAMILY Protein kinase-like (PK-like) 337 628 IPR011009 -
Mal6g0487 673 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 11 671 - -
Mal6g0487 673 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 11 671 - -
Mal6g0487 673 Gene3D Transferase(Phosphotransferase) domain 1 432 634 - -
Mal6g0487 673 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Mal6g0487 673 CDD STKc_IRAK 362 626 - -
Mal6g0487 673 ProSiteProfiles Gnk2-homologous domain profile. 145 253 IPR002902 -
Mal6g0487 673 ProSiteProfiles Gnk2-homologous domain profile. 32 137 IPR002902 -
Mal6g0487 673 Gene3D - 31 137 IPR038408 -
Mal6g0487 673 Gene3D - 148 253 IPR038408 -
Mal6g0487 673 Pfam Salt stress response/antifungal 158 249 IPR002902 -
Mal6g0487 673 Pfam Salt stress response/antifungal 42 134 IPR002902 -
Mal6g0487 673 Gene3D Phosphorylase Kinase; domain 1 319 431 - -
Mal6g0487 673 ProSiteProfiles Protein kinase domain profile. 356 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0487 Mal-Chr6 6201677 6204532 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0487 33 646 Receptor kinase-like Gene Family AT4G23230 42.948 2.25e-170 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal6g0487 PK_Tyr_Ser-Thr 7.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0487 - - gmx:102669229 962.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0487 6 6201677 6204532 Mal1g0631 1 7345561 7348414 PCT