Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0486 ATGTTTCATTATCTTATAGTTTCCAAATCCATTCAATTTTTCCTTGTTCTTTCTACTCTTGCTTTTTTTTCATATGTTGCCTTTGCAGATCCTCCATATGAAATTTGTTCCACAAGAAACATCTATACAAATGGAAGTTCCTTTGAGAATAATCTAAACAATTTACTTCTCTCTTTACCCTCTAATGCTTCAAGTTCAATCTCCAAATTTGGTAACACTTCTTCGGGGATTGGGCTAGATAGAGTTTATGGCCTCTACATGTGCCTCGACTTTGTTTCGAATGAAACTTGTCACAAATGCGTAACAAACGCAATAGCGGACATTGTAAAACTCTGTCCTCAATCAAAAGAAGCAGTTGTATATGAAGAATTCTGTCAATTACGTTATTCCGATAAAAATTTCATAGGCTCATTGAATGTCAATGGAAACATTGGAAAAGATAATGTACAGAATATTTCCGAACCGGAGAAATATGAGTCTTCTGTGAATAAGATATTGAATAATCTTACCGAGATAGCGTCTTTTAATGTTTCGGCAAACATGTATGCTACTGGAGAAGTACCCTTTGAAGATAGAACAATACACGCCTTAGTGCAGTGTACTAGAGATTTATCAGCTAATGATTGCAGTAGGTGTCTACTAAGTGCTATTGGAGATATACCAGGTTGTTGCTATGCCTCAATTGGTGCTAGAGTTTTGAGTCGTAGCTGTTATTTGAGATATGAATTTTATCCATTTTATCTTGGTGAAACCGAATCCGCAAGTTCTTCAACAAACCAAGGAGGGAAAAATAATTCAAGCAAAATATGGATGATTACAGCAATTGCAGTTGGGGTAGGCTTGGTGATAATAATTTTCATTTGCTACTTATGCTTTCTTAGAAATTGGCAAAGTAATAAGGGAAACGGCAAAATATCTAAGGATTTCCCTTTTATTGATCTTGGATCTCTTCGAGTAGCTACCAGAAACTTCTCCGATTCAAATAAGCTCGGGGAAGGTGGTTTTGGGCCTGTTTACAAGGGTATACTCAGTGATGGGCAAGAAGTGGCAATCAAGAGACTCTCGACTTGCTCAGAGCAGGGCTCAGAAGAATTCATTAACGAAGTTATGCTGATATTGAAACTTCAACACAAAAATCTTGTAAAGCTTTTGGGATTTTGTGTGGATGGAGAAGAGAAGCTTCTTGTATATGAATATTTGCCCAATGGTAGCCTTGATGTCATCCTTTTTGAGCAACGTGCACAGCTGGATTGGACGAAACGGCTTGATATAATAAATGGAATAGCAAGGGGAATTCTTTATCTTCATGAAGATTCTAGACTTCAAATAATACATAGAGATCTAAAAGCAAGTAATGTGTTGTTGGACAATGACATGAATCCAAAGATTTCAGACTTTGGAATGGCCAGAATATTTGCAGGAAGTGAAGGTGAAGCTAACACTACTACAATAGTTGGCACATATGGATATATGGCTCCAGAGTATGCAATGGAGGGCATATATTCCATAAAATCAGATGTTTTCGGCTTTGGAGTACTATTGCTTGAGATCATTACAGGGAAACGTAACACAGGTTTCTATTACTCCAAAACCACTCCTAGCCTTCTAGCATATGCATGGCATCTATGGAATGATGGAAAGGGATTGGAGTTAAGGGATCCAATGTTATTATGCCCTGGAGACCAGTTTTTGAGATACATGAATATTGGACTGCTATGTGTTCAAGAAGATGCATTTGATAGGCCAACCATGTCTTCTGTTGTTTTGATGTTGATGAATGAGTCTGTAATGCTTGGCCAACCAGGAAAACCACCTTTCTCTGTAGGGAGACTCAAAGCTATTGATCAAAATGAGCTAGAGTTTGAAGATTATTCAGTCAATTTCTTAACTGTTTCTGATATCTTGCCCGTGTAA 1914 0.3741 MFHYLIVSKSIQFFLVLSTLAFFSYVAFADPPYEICSTRNIYTNGSSFENNLNNLLLSLPSNASSSISKFGNTSSGIGLDRVYGLYMCLDFVSNETCHKCVTNAIADIVKLCPQSKEAVVYEEFCQLRYSDKNFIGSLNVNGNIGKDNVQNISEPEKYESSVNKILNNLTEIASFNVSANMYATGEVPFEDRTIHALVQCTRDLSANDCSRCLLSAIGDIPGCCYASIGARVLSRSCYLRYEFYPFYLGETESASSSTNQGGKNNSSKIWMITAIAVGVGLVIIIFICYLCFLRNWQSNKGNGKISKDFPFIDLGSLRVATRNFSDSNKLGEGGFGPVYKGILSDGQEVAIKRLSTCSEQGSEEFINEVMLILKLQHKNLVKLLGFCVDGEEKLLVYEYLPNGSLDVILFEQRAQLDWTKRLDIINGIARGILYLHEDSRLQIIHRDLKASNVLLDNDMNPKISDFGMARIFAGSEGEANTTTIVGTYGYMAPEYAMEGIYSIKSDVFGFGVLLLEIITGKRNTGFYYSKTTPSLLAYAWHLWNDGKGLELRDPMLLCPGDQFLRYMNIGLLCVQEDAFDRPTMSSVVLMLMNESVMLGQPGKPPFSVGRLKAIDQNELEFEDYSVNFLTVSDILPV* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0486 637 ProSiteProfiles Gnk2-homologous domain profile. 29 134 IPR002902 -
Mal6g0486 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Mal6g0486 637 Gene3D Phosphorylase Kinase; domain 1 293 399 - -
Mal6g0486 637 CDD STKc_IRAK 330 593 - -
Mal6g0486 637 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 60 634 - -
Mal6g0486 637 SUPERFAMILY Protein kinase-like (PK-like) 305 591 IPR011009 -
Mal6g0486 637 Gene3D - 30 134 IPR038408 -
Mal6g0486 637 Gene3D - 144 246 IPR038408 -
Mal6g0486 637 Pfam Protein tyrosine and serine/threonine kinase 327 588 IPR001245 GO:0004672|GO:0006468
Mal6g0486 637 SMART serkin_6 324 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0486 637 ProSiteProfiles Protein kinase domain profile. 324 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0486 637 Pfam Salt stress response/antifungal 150 243 IPR002902 -
Mal6g0486 637 Pfam Salt stress response/antifungal 36 131 IPR002902 -
Mal6g0486 637 Gene3D Transferase(Phosphotransferase) domain 1 400 598 - -
Mal6g0486 637 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 60 634 - -
Mal6g0486 637 ProSiteProfiles Gnk2-homologous domain profile. 140 246 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0486 Mal-Chr6 6197255 6199985 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0486 10 612 Receptor kinase-like Gene Family AT4G05200 43.574 8.19e-168 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal6g0486 PK_Tyr_Ser-Thr 4.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0486 - - gmx:100798666 920.998