Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0479 ATGTTTAATTCTCCATATCAAAATCACATCATGAACATGTATCAGAATACATTGACAAGGGCAAGAGAAGAAGAAGCTGGCCAAATGAACGTTGAAGGTTCTTCAAGTGATGACCAACGTCCCACAAAAAGGAACTATCGCCGCCACACACAGCAACAAATTGATCAAATGGACGCTTTCTTCAAGCAGTGTCCTCACCCAACTGAGAGGCAGAGAAAAGAGCTGAGCCAACTTCTTGGGTTAGAGCCTACACAAATCAAATTTTGGTTTCAGAATAGGCGCACTTCTATCAAGGTTCAAAGTGAACGTGATGAAAATGAAGTTTTGAAGGCCGAGAATGAAAAGCTCCAAGAGGAGGTTAACAGGTACAAAGAGGCAATCGGTACCACATGCAACGTATGTGGAAGCCCAACTACCGTTGGGGTAATGTCTCATGAGGAGCAGCAACTTCGGTTGGAAAATGCTCTCCTTAGAAAAGAGCTTGAAAGGTTTGGGGGCCAGACACCAACAAATCATGCAGATTCTCGGGCGATCATAACATCATCTGATAATAGCAACCAAGTTCCTTCTCGCTCGATCAATGTTGGAGGTAACAATGGAGCCCTAACCAGAATGGTAGGAGAGGAATACGCGGGTGGTGCTGCCGTGCCAACACAGGGTCTTAACGACCGGCAAAAGATCATAGAGCTTGCTGTTGTTGGAATGGATGAACTTACCAAATTGGGTAGGACATATGGACTACCTCTTTGGATCCCCACCAACAACTTTACTGAGATTCTCAATGAAGAAGAATACCTGAGGCATTTCCCAAAGGGTAATGGTCCCAACCCATTGGGATTAAGGTCTGAAGGATCTAAAGAATCTGTGGTAGTAATGATGAGTGCTACTAATCTTGTTGATGTCCTTATGGATGTGAATCAATGGTCAAATATGTTTTGCGGCATTGTTTCAAGAGCAGCAACACTGAAAGTCCTTTCAACTGGAGTGGCAGGAAGCTATAATGGAGCATTGCAAGTGATGTCAGCTGAGTTTCAAGTCCCTTCCCCACTTGTTCCTACTCGTGAAAACTATTTCGTGAGATACTGTAAACTCCATCCAGATGGAATATGGGTAGTGGCTGATGTGTCATTGCATAATATGTTAACTGCAGCATCTGGTAGTAGCAGTACTTCCTCAAGAACCCAAAGAAGAACCTCTGGTTGTTTGATTCAGCAACTCCCTAATGGCCACTCCTCCAAGGTTATATGGATTGAAAATGTAGAAGTGGATGATGAAGTGGTGCTGCACAATATATATAGACCTCTAATTAATTCTGGACTTGCTTTTGGAGCTAAACGCTGGGTAGCTACATTACAAAGACAATGCGATCGTGTTGCTTTTTCAATGGTCAACAACATATCTGTTACAGGAGACCCTTCTGTGTTCGGATTCATTACTGAGGGAAAGAAAGGTATACTTAATCTTGCGGAAAGGATGATGGCTAGCTTTAGTACTAGTATTGGTTCTTCTACCACACATGCTTGGACAAAGGTACCTGGAAATGGACCGGAGAATGTAATGGTCATGACGAAAAGGTATTTCGATGAATCCAACAGTGAAAGACCCGCCAGTGTAGTGCTCAGTGCTGCTACTTCTTTTTGGCTTCCTGTTCCTCCCAGGAGAGTTTTCGATTTTCTTCGTGATCAAAACTCAAGAAGACATTGGGATATTCTCTCCAGCGGCGGTATTGTTCATGAATTGGCCCACATTTCAAATGGTCGTGATCCTGCCAACTATGTCTCTTTACTTAGGATCAATAGTGCAAATACAATGCAGAGTGATATGGTGATACTGCAAGAGAACTGCACTGATGTAACTGGCTCATATGTAGTTTATGCACCTGTGGAAGCATCTTCAATGGAGTTAGTATTGAGCGGCGGGGACACAAATCGTCTTGCTTTGCTTCCTTCCGGATTCGCTATTTTTCCGGATGGATGTATAACAAATGCAGGACCAATTATGAATGTTGGAACTGGAGGGTCCCTTGTCACAGTTGCATTTCAGATTTTAGTTGATTCTATTCCACATGCAAGGATAGCTCTGGGTTCAATCACAACTGTTAACACTTTGATCAAGAGCACTGTGGAAAGGATTAAAGCTGAAGTGATGCCGAACGTCGTCATATTACCTTCATATGGGTTTTGGGCAATTTGTGTTCTTTTCTTTGTTTTTTTCTTAGTTTTTTTTTTTTCTTGTCTTCGTCCTTCAATCTTGTGA 2256 0.4264 MFNSPYQNHIMNMYQNTLTRAREEEAGQMNVEGSSSDDQRPTKRNYRRHTQQQIDQMDAFFKQCPHPTERQRKELSQLLGLEPTQIKFWFQNRRTSIKVQSERDENEVLKAENEKLQEEVNRYKEAIGTTCNVCGSPTTVGVMSHEEQQLRLENALLRKELERFGGQTPTNHADSRAIITSSDNSNQVPSRSINVGGNNGALTRMVGEEYAGGAAVPTQGLNDRQKIIELAVVGMDELTKLGRTYGLPLWIPTNNFTEILNEEEYLRHFPKGNGPNPLGLRSEGSKESVVVMMSATNLVDVLMDVNQWSNMFCGIVSRAATLKVLSTGVAGSYNGALQVMSAEFQVPSPLVPTRENYFVRYCKLHPDGIWVVADVSLHNMLTAASGSSSTSSRTQRRTSGCLIQQLPNGHSSKVIWIENVEVDDEVVLHNIYRPLINSGLAFGAKRWVATLQRQCDRVAFSMVNNISVTGDPSVFGFITEGKKGILNLAERMMASFSTSIGSSTTHAWTKVPGNGPENVMVMTKRYFDESNSERPASVVLSAATSFWLPVPPRRVFDFLRDQNSRRHWDILSSGGIVHELAHISNGRDPANYVSLLRINSANTMQSDMVILQENCTDVTGSYVVYAPVEASSMELVLSGGDTNRLALLPSGFAIFPDGCITNAGPIMNVGTGGSLVTVAFQILVDSIPHARIALGSITTVNTLIKSTVERIKAEVMPNVVILPSYGFWAICVLFFVFFLVFFFSCLRPSIL* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0479 751 ProSiteProfiles START domain profile. 288 460 IPR002913 GO:0008289
Mal6g0479 751 SUPERFAMILY Bet v1-like 503 712 - -
Mal6g0479 751 Gene3D - 273 460 IPR023393 -
Mal6g0479 751 SMART START_1 228 457 IPR002913 GO:0008289
Mal6g0479 751 Gene3D - 10 117 - -
Mal6g0479 751 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 25 716 - -
Mal6g0479 751 ProSitePatterns 'Homeobox' domain signature. 75 98 IPR017970 GO:0000981|GO:0006355
Mal6g0479 751 CDD homeodomain 43 101 IPR001356 GO:0003677
Mal6g0479 751 ProSiteProfiles 'Homeobox' domain profile. 40 100 IPR001356 GO:0003677
Mal6g0479 751 SUPERFAMILY Bet v1-like 284 457 - -
Mal6g0479 751 Coils Coil 99 126 - -
Mal6g0479 751 SMART HOX_1 42 104 IPR001356 GO:0003677
Mal6g0479 751 MobiDBLite consensus disorder prediction 25 50 - -
Mal6g0479 751 CDD START_ArGLABRA2_like 224 455 - -
Mal6g0479 751 Pfam START domain 258 456 IPR002913 GO:0008289
Mal6g0479 751 Pfam Homeodomain 43 95 IPR001356 GO:0003677
Mal6g0479 751 SUPERFAMILY Homeodomain-like 31 98 IPR009057 -
Mal6g0479 751 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 25 716 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0479 Mal-Chr6 6086399 6091451 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0479 39 719 Homeobox Transcription Factor Family AT4G04890 57.183 0.0 786
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mal6g0479 START 3.4e-44 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0479 K09338 - qsu:112016283 817.379