Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0472 ATGGAATTACAAAACATTGTTACTGTGCTTCTTCTTCTCATGCTTTTTCTCATCTTCATTTTCCTCTTCTTTCTCTTCAAACCATGGCGCTTCTTTTTCTCTACTCGTTTTCGTTCTTTCATCAAGGGTTCTGTTGATGAATTAGAGAGGCCATTAGTTGAAGATAATCATAATCTTAATCAGATTAATAATAATGGATTATTATCTAGGGATTATGATCTTGAAGCTCAAATTCGAAAGAACGATTTTCGAAATGATACTAGATTGCAGGATTTTGTGGAAAGAGATATCAGTGATCAAAGAAGTTGTCTTACTTTGGAGGTTATCAGTGGTCCTTCTCGCGGACAACGATGGTCTGTACAGTCAACGGAAACTTCTCGTTTACCGTTGACGTTGGGACGGATTTTTCCAAGTGATTTTTTGATAAAGGATAATGAAGTTTCGGGAAAACATGCTTTGATCAAGTGGAATTTGGATATGATGAAATGGGAGTTGGTGGATATGGGTAGCCTGAATGGAACACTTTTGAATTCTAAGTCAATCAATCATCCGGACACTGGACGTAGGCATTGGGGAGATTCGATGAATCTTGCTAATGGAGATGTTATAACACTTGGAACAACATCAAAAATAATTGTTCATATTACTTCGCAAAATCATCATCACATTCCCTTTGGAGTTGGTATGGCATCAGATCCCATGGCTTTGCGTCGAGGAGGAAAAAAACTTCCTATGGAGGATGTTTGCTATTATCAATGGCCTCTACCTGGACTGGATAAGTTTGGACTTTTTGGCATTTGTGATGGGCACAGTGGCGATGCGGCTGCCAAATCTGCTAGCAAACTTTTTCCCGAGATAATTTCTAGTATATTATCGGATTCATCAAAAAGGGAGAGGGTTTTATCACTTTGTGATGCTTCGGATATTCTTCGAGATGCATTTTCTCAAACAGAAGCACGCATAAATAACTCCTATGAGGGATGTACAGCAACAGTGCTTCTGGTGTGGGCTGACAGTGGTGATAATTTCTATGCACAATGTGCAAATGTTGGAGATTCTGAATGCATTATGAGTGTTAATGGGCAACAAATCAAGATGACAGAGGATCACAAGATATCAAATTACTCTGAAAGACTCAGAATGGAAGGGACGGGTGAACCATTGAAAGATGGGGAAACCCGACTATATGGTATAAATCTTGCAAGGATGCTTGGCGACAAATTCCTAAAACAGCAGGATTCCCGGTTCAGTTCAGAACCTTATATAAGTGAGGCTGTTCATATTCACCCGTCAAGCAAGGCTTTTGCTGTTCTAGCTAGTGATGGGTTATGGGACGTCATCAGCACGAAAAAGGCGATTCAGCTAGTGATTCAGGCCAGGGAGCGATACAATACAGATAGAGAGAATACAGCAGAAAAGATTGCTAGTTTGTTGTTGAGTGAAGCTAGAACAAACAAAACCAAGGATAATACCTCTATAATATTCTTAGATTTTGATATCTTCAATAGAATATCTTGTAAAGTTGAATCCTAG 1533 0.3914 MELQNIVTVLLLLMLFLIFIFLFFLFKPWRFFFSTRFRSFIKGSVDELERPLVEDNHNLNQINNNGLLSRDYDLEAQIRKNDFRNDTRLQDFVERDISDQRSCLTLEVISGPSRGQRWSVQSTETSRLPLTLGRIFPSDFLIKDNEVSGKHALIKWNLDMMKWELVDMGSLNGTLLNSKSINHPDTGRRHWGDSMNLANGDVITLGTTSKIIVHITSQNHHHIPFGVGMASDPMALRRGGKKLPMEDVCYYQWPLPGLDKFGLFGICDGHSGDAAAKSASKLFPEIISSILSDSSKRERVLSLCDASDILRDAFSQTEARINNSYEGCTATVLLVWADSGDNFYAQCANVGDSECIMSVNGQQIKMTEDHKISNYSERLRMEGTGEPLKDGETRLYGINLARMLGDKFLKQQDSRFSSEPYISEAVHIHPSSKAFAVLASDGLWDVISTKKAIQLVIQARERYNTDRENTAEKIASLLLSEARTNKTKDNTSIIFLDFDIFNRISCKVES* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0472 510 CDD PP2Cc 238 498 IPR001932 -
Mal6g0472 510 Gene3D - 234 504 IPR036457 -
Mal6g0472 510 PANTHER PROTEIN PHOSPHATASE 2C 70 96 509 - -
Mal6g0472 510 Pfam Protein phosphatase 2C 237 491 IPR001932 -
Mal6g0472 510 SMART FHA_2 129 181 IPR000253 GO:0005515
Mal6g0472 510 ProSiteProfiles PPM-type phosphatase domain profile. 226 498 IPR001932 -
Mal6g0472 510 PANTHER PROTEIN PHOSPHATASE 2C 96 509 IPR015655 GO:0004722|GO:0006470
Mal6g0472 510 CDD FHA 104 209 IPR000253 GO:0005515
Mal6g0472 510 Gene3D - 98 233 - -
Mal6g0472 510 SUPERFAMILY SMAD/FHA domain 102 213 IPR008984 GO:0005515
Mal6g0472 510 Pfam FHA domain 131 206 IPR000253 GO:0005515
Mal6g0472 510 ProSiteProfiles Forkhead-associated (FHA) domain profile. 130 181 IPR000253 GO:0005515
Mal6g0472 510 SMART PP2C_4 220 496 IPR001932 -
Mal6g0472 510 SUPERFAMILY PP2C-like 239 499 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0472 Mal-Chr6 5948456 5954187 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0472 88 499 PP2C-type Phosphatase Gene Family AT5G19280 62.028 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0472 K01090 - gmx:100170643 719.924