Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0461 ATGGAGCTTCTACCAACGGAGAAGAAGAAAGGCCAGAAGAGAAAACTTGAAGTAGAAGAAGAATTCCAACAAGACACACAGATCTCTCTTCCTCTCACCGGCGACGCACGCGACGCTATTCTTTCCGACGTTAACCAACACGTTTCAATTCTCCTTTCCACTTTCTCATCCAACGAATTCGATAGAGCTTCCGCTAAACGCGCCACTCACGCTCTCGCCGATCTTGCCAAAAACGAGGAAGCTGTGAATGTGATTGTTGAAGGAGGTGCTATTCCGGCTTTGATTAAGCATCTTCAATCGCCTCCTCATGAAAATGATTTTGTTCAGAAGCCGTTGCCGTTTGAACATGAGGTTGAGAAAGGGAGTGCTTTCGCACTTGGACTTCTTGCTGTCAAGCCAGAACATCAACAACTCATCGTTGACAGTGGTGCCTTGAAGCATCTTGTTGATCTTTTAAAGAGACATAAGAATGGATTAACATCACGTGCCATTAATAGTCTCATTCGGAGGGCTGCAGATGCGATCACTAATCTTGCTCACGAGAACAGCAGTATTAAAACCCGTGTGAGGACGGAAGGTGGGATTCCACCATTAGTTCATTTGCTTGAATTTGCGGATACAAAGGTGCAAAGAGCAGCTGCTGGTGCATTACGAACCTTGGCTTTTAAAAATGATGAAAACAAGAATCAGATTGTTGAATGCAATGCTCTTCCAACTCTGATTCTGATGCTTCGGTCGGAAGATGCTGCTATTCATTATGAAGCGGTTGGTGTGATTGGAAATCTGGTCCACTCATCCCCCAATATAAAGAAAGAAGTTATTCTTGCTGGAGCCTTGCAACCTGTTATTGGATTACTTAGCTCCTGTTGCTCTGAAAGCCAGAGGGAAGCAGCATTATTACTTGGACAGTTTGCAGCAACTGATTCAGACTGCAAGGTTCACATTGTACAGAGAGGTGCTGTACGACCTTTGATAGATATGCTTCAGTCTTCGGATGTTCAGCTCAGAGAAATGTCTGCTTTTGCATTGGGGAGATTGGCACAGGACACACATAACCAAGCTGGTATTGCACACAGTGGCGGATTAATGCCATTACTGAAGCTTCTTGACTCAAAAAATGGGTCTTTGCAACATAATGCTGCTTTTGCTCTTTACGGCCTTGCAGAGAATGAGGATAATGTGCCTGACTTTATTAGGGTAGGTGGAATTAAGAGACTCCAGGATGGAGAGTTTATAATTCAAGCAACTAAGGATTGTGTTGCTAAGACATTGAAAAGGCTAGAAGAGAAGATTCATGGTCGTGTGCTGAACCATTTGTTATATCTTATGAGAGTTTCAGAAAAGGCATTCCAAAGACGAGTTGCTTTGGCTCTTGCTCATCTTTGTTCTGCAGACGACCAGAGAAAAATATTTATTGACCACAATGGGCTGGAGTTGCTTGTTGGACTTCTTGGCTCATCTTGCCCTAAGCAGCAGCTTGATGGTGCCATGGCTTTATTCAAGTTGGCCAACAAAGCTATGACTCTGTCTCCTGTAGATGCTGCTCCTCCATCCCCAACACCTCAGGTCTATTTGGGAGAGCAGTATGTAAACAATGCTACCTTGTCCGACGTTACATTTTTGGTTGAAGGTAAACGGTTTTATGCTCATAGGATCTGTCTACTTGCATCTTCAGATGCATTTCGTGCAATGTTTGATGGTGGTTATAGGGAGAAGGATGCACGGGATATTGAGATTCCAAATATTAGATGGGAGGTCTTTGAGCTTATGATGAGATTTATCTATACTGGATCGGTTGATGTCACTCTTGAAATTGCTCAAGATCTCCTCCGAGCAGCTGATCAATATCTCTTAGAAGGGCTTAAGAGACTATGTGAATACACGATTGCACAGCATGTATCACTCGAGAACGTGTCAAGTATGTATGAACTTTCGGAAGCCTTCAATGCTATATCATTGAGACACACATGCATCCTTTTTATCTTGGGGCACTTCGATAAACTACGTGAAATGCCAGGGAACTCTGATTTTATTCAGAATACAATACCAGAGATCCGCAATTACTTTGTTAATGCTCTTACAAAGGGGAACTCCAACATCCAGGCGTAA 2109 0.4324 MELLPTEKKKGQKRKLEVEEEFQQDTQISLPLTGDARDAILSDVNQHVSILLSTFSSNEFDRASAKRATHALADLAKNEEAVNVIVEGGAIPALIKHLQSPPHENDFVQKPLPFEHEVEKGSAFALGLLAVKPEHQQLIVDSGALKHLVDLLKRHKNGLTSRAINSLIRRAADAITNLAHENSSIKTRVRTEGGIPPLVHLLEFADTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDAAIHYEAVGVIGNLVHSSPNIKKEVILAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIDMLQSSDVQLREMSAFALGRLAQDTHNQAGIAHSGGLMPLLKLLDSKNGSLQHNAAFALYGLAENEDNVPDFIRVGGIKRLQDGEFIIQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVSEKAFQRRVALALAHLCSADDQRKIFIDHNGLELLVGLLGSSCPKQQLDGAMALFKLANKAMTLSPVDAAPPSPTPQVYLGEQYVNNATLSDVTFLVEGKRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLEIAQDLLRAADQYLLEGLKRLCEYTIAQHVSLENVSSMYELSEAFNAISLRHTCILFILGHFDKLREMPGNSDFIQNTIPEIRNYFVNALTKGNSNIQA* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0461 702 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 7 698 IPR044282 -
Mal6g0461 702 SUPERFAMILY ARM repeat 434 610 IPR016024 -
Mal6g0461 702 CDD BTB_POZ_ARIA_plant 523 638 - -
Mal6g0461 702 Pfam Armadillo/beta-catenin-like repeat 189 221 IPR000225 GO:0005515
Mal6g0461 702 Pfam Armadillo/beta-catenin-like repeat 224 263 IPR000225 GO:0005515
Mal6g0461 702 Pfam Armadillo/beta-catenin-like repeat 308 347 IPR000225 GO:0005515
Mal6g0461 702 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 360 402 IPR000225 GO:0005515
Mal6g0461 702 Gene3D - 35 163 IPR011989 -
Mal6g0461 702 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 319 361 IPR000225 GO:0005515
Mal6g0461 702 ProSiteProfiles BTB domain profile. 536 603 IPR000210 GO:0005515
Mal6g0461 702 SMART BTB_4 536 633 IPR000210 GO:0005515
Mal6g0461 702 SMART arm_5 308 348 IPR000225 GO:0005515
Mal6g0461 702 SMART arm_5 464 504 IPR000225 GO:0005515
Mal6g0461 702 SMART arm_5 266 306 IPR000225 GO:0005515
Mal6g0461 702 SMART arm_5 224 264 IPR000225 GO:0005515
Mal6g0461 702 SMART arm_5 78 131 IPR000225 GO:0005515
Mal6g0461 702 SMART arm_5 182 222 IPR000225 GO:0005515
Mal6g0461 702 SMART arm_5 349 389 IPR000225 GO:0005515
Mal6g0461 702 SMART arm_5 132 180 IPR000225 GO:0005515
Mal6g0461 702 Gene3D - 164 266 IPR011989 -
Mal6g0461 702 Gene3D Potassium Channel Kv1.1; Chain A 517 664 IPR011333 -
Mal6g0461 702 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 193 228 IPR000225 GO:0005515
Mal6g0461 702 SUPERFAMILY ARM repeat 47 407 IPR016024 -
Mal6g0461 702 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 7 698 - -
Mal6g0461 702 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 235 277 IPR000225 GO:0005515
Mal6g0461 702 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 143 193 IPR000225 GO:0005515
Mal6g0461 702 Pfam BTB/POZ domain 529 631 IPR000210 GO:0005515
Mal6g0461 702 SUPERFAMILY POZ domain 528 631 IPR011333 -
Mal6g0461 702 Gene3D - 267 511 IPR011989 -
Mal6g0461 702 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 89 144 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0461 Mal-Chr6 5878704 5885932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0461 198 413 U-box Gene Family AT3G46510 27.948 1.21e-13 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mal6g0461 BTB 3.7e-26 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0461 - - gmx:100812456 1207.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0461 6 5878704 5885932 Mal1g0693 1 7900576 7912313 PCT