LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal6g0450	ATGCCTTTAGCTATGTTTCTACCATGTATTTATATTCTTGTTCTAATTTCATATTTAAATGGCCTATATGCCATAGACTTAAATTCAAGCATCACTGCTGGATCAAATTCAACTTGGAAATCACCTTCCGGCGATTTCGAATTCGGATTCTACCCTCTTCCCAATGGTCTTTTCCTAGTAGGAATATGGTTTGCAAAAATCCCACAAAAAACATTGGTATGGTACCAAAGTCCCTCAGTTGAACCAAATTCCTTACTCCAACTCACTTCTGAAGGACACCTTGTGATAACACATCCCAATGGAACCACTTCTCATACCATAGACAACATTGGAGGAGATAGTGAAGCTGCAAATTCAGCTAATATGCAAGATGATGGAAATTTTGTGTTGAAAGACTCCAACCTAAGAAATGTGTGGGAGAGTTTCAATTCTCCAGCTGATACAATCTTACCTGGACAAACCTTGAAAAGCAATCAAATTCTTTATTCTAAAGGGAAAGGAGATTCAAACTACTCAATGGGAAATTTCATGCTTCAAATGCAGGGTGATGGTAACTTGATCCTCAAGGCACATCAATGGTCAGATCCTTCATATTGGTACACTTCAACTTTAGTCTCAAATTTGAATTTGGTATTCAATGAAACTAGTTCTTTATTGTATCTTGCAACTGGCAATGGAAACATTATTTACTCATTAACAAAAAGTACTCGAACTCCAGTAAAAGATTACTATCATCGCGCTAAAATTGATGAAAATGGAAATTTCCAACAATATGTGTATCACAAAAGAAATGGAACTAATTGGGAAAGGGTTTGGAGAGCTATAGATGATCCATGTAGAGTAGATTATGTTTGTGGAATTTATGGTTTATGCACTTCTCCTGATAATGAATCAGTGAACTGTGAGTGTATTCAAGGTTATATTCCATTGGATCAAGAAGATGTGTCTAAAGGGTGTCATACAAAAACTGTAATCAATTATTGTAGTGGACCTTCTATGATGAATTTTGAGCTGCATGTGTTTGATGACACTGATTTTCAATTTTATCCTGATTTTGCTCTAATAAATGATGTTGATTTGGAAGGTTGTAAGAAGTCTGTAATGGATGATTGCAATATCATTGCTGCTACTTATAATTCTTCAACTTCAACATGTGCTAAGAAGAGAATGCCATTGCTGAATGCTAGAAACAGTTCATCTTCCAAGGGACAAAAAGCACTTCTCAAAGTTCCTTATGGTAATAATGAGTCTAACACATTTGGAGTTTCAAAGAACAAGAGTTTTAATGTGAGAGTTTTTTTGAAGGTTATGGTTGCAATTAGTGCAACTCTTGCATGCTTCTTTGGAGCTCTTGCTGCTTATTATCATCCTTTTGTGAAGAGACTAATAACAAGAAGAAAAAAGTATTTGAATGCAACAGCTATTGGAATCAACTTTAGAGAATTCACATTCCAGGAATTGCATGAAGCAACAGATGGATTTAGTAGGATTCTTGGAAGGGGATCTTCGGGGAAAGTCTACCGCGGTACTTTGATTATTGATGACGCAGAAATCGGTATTGCGGTGAAGAAGCTTGATAAGAAGATTGAGAAAAGTGAGAATGAGTTCATGACTGAGCTCAAAATTATAGGACTTACACATCACAAAAATTTGGTGAAACTTTTGGGATTTTGCATGGAGAATAACCATAGAATACTTGTCTATGAGCTAATGCCAAATGGAGCATTGTCAAGTTTATTGTTTGGAAAAGGAGAGAGACCTCAATGGAGTAAAAGAGTTGAAATGGCTCTTGGAATAGCAAAAGGCTTACTCTACTTGCATGAAGAGTGTGAAACACAGATCATACATTGTGATATCAAGCCACAAAATGTATTACTTGATGATAATCATATTGCAAAGATTGCTGATTTTGGACTTTCCAAGCTTTTAAACAAAGATCAAACTAGAACAAGTACTAATTTTAGAGGGACAATAGGGTACATAGCACCTGAATGGTTAAGGAGTGCACCAATAACTGCAAAAGTTGATGTTTTCAGCTTTGGTGTTATGCTACTTGAAATTATTTGTTGTAGGAGGCATGTTGAGTCATATCAAAGTCATGATGAGGGTGAGAGAGATAGTGAAGATGATGATTTGGTTCTTGTTAATTTGATTTTAAGGTGCATGGTTACTAGGAAACTAGAGATAGTGGTGAGTCATGACTTAGAAGTACTCAATGATTTCAAGAGATTTGAACAAATGGCTTTGGTTGGATTATGGTGTCTTCATCCAAACCCAACTCTTAGACCTTCAATGAAGAAAGTGACTCAAATGCTAAAGGGAACAGTGGAAGTTGGTGTTCCACCTTTGCTTCATGATCAGATAATGGCAAATCAGAACTCTTATAGTTTGTGA	2394	0.3601	MPLAMFLPCIYILVLISYLNGLYAIDLNSSITAGSNSTWKSPSGDFEFGFYPLPNGLFLVGIWFAKIPQKTLVWYQSPSVEPNSLLQLTSEGHLVITHPNGTTSHTIDNIGGDSEAANSANMQDDGNFVLKDSNLRNVWESFNSPADTILPGQTLKSNQILYSKGKGDSNYSMGNFMLQMQGDGNLILKAHQWSDPSYWYTSTLVSNLNLVFNETSSLLYLATGNGNIIYSLTKSTRTPVKDYYHRAKIDENGNFQQYVYHKRNGTNWERVWRAIDDPCRVDYVCGIYGLCTSPDNESVNCECIQGYIPLDQEDVSKGCHTKTVINYCSGPSMMNFELHVFDDTDFQFYPDFALINDVDLEGCKKSVMDDCNIIAATYNSSTSTCAKKRMPLLNARNSSSSKGQKALLKVPYGNNESNTFGVSKNKSFNVRVFLKVMVAISATLACFFGALAAYYHPFVKRLITRRKKYLNATAIGINFREFTFQELHEATDGFSRILGRGSSGKVYRGTLIIDDAEIGIAVKKLDKKIEKSENEFMTELKIIGLTHHKNLVKLLGFCMENNHRILVYELMPNGALSSLLFGKGERPQWSKRVEMALGIAKGLLYLHEECETQIIHCDIKPQNVLLDDNHIAKIADFGLSKLLNKDQTRTSTNFRGTIGYIAPEWLRSAPITAKVDVFSFGVMLLEIICCRRHVESYQSHDEGERDSEDDDLVLVNLILRCMVTRKLEIVVSHDLEVLNDFKRFEQMALVGLWCLHPNPTLRPSMKKVTQMLKGTVEVGVPPLLHDQIMANQNSYSL*	798

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal6g0450	797	ProSitePatterns	Protein kinases ATP-binding region signature.	498	524	IPR017441	GO:0005524
	Mal6g0450	797	Pfam	D-mannose binding lectin	78	159	IPR001480	-
	Mal6g0450	797	SMART	blect_4	30	145	IPR001480	-
	Mal6g0450	797	Pfam	S-locus glycoprotein domain	240	309	IPR000858	GO:0048544
	Mal6g0450	797	SMART	serkin_6	492	772	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal6g0450	797	PIRSF	SRK	1	796	IPR024171	GO:0004674
	Mal6g0450	797	Gene3D	Phosphorylase Kinase; domain 1	466	570	-	-
	Mal6g0450	797	Pfam	Protein kinase domain	496	770	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal6g0450	797	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	4	784	-	-
	Mal6g0450	797	Gene3D	-	23	144	IPR036426	-
	Mal6g0450	797	SUPERFAMILY	alpha-D-mannose-specific plant lectins	58	203	IPR036426	-
	Mal6g0450	797	PANTHER	SERINE/THREONINE-PROTEIN KINASE	4	784	-	-
	Mal6g0450	797	SUPERFAMILY	Protein kinase-like (PK-like)	479	779	IPR011009	-
	Mal6g0450	797	ProSiteProfiles	Protein kinase domain profile.	492	784	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal6g0450	797	ProSiteProfiles	Bulb-type lectin domain profile.	24	143	IPR001480	-
	Mal6g0450	797	Gene3D	Transferase(Phosphotransferase) domain 1	571	779	-	-
	Mal6g0450	797	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	614	626	IPR008271	GO:0004672\|GO:0006468
	Mal6g0450	797	Gene3D	-	145	279	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal6g0450	Mal-Chr6	5772763	5775156	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal6g0450	436	782	Receptor kinase-like Gene Family	AT3G53380	38.701	2.44e-66	232

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Mal6g0450		Pkinase	4.3e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal6g0450	-		-	lang:109330973	1212.21