Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0449 ATGATTGTGATGGCAGAACGAGAACCTGCATACACTGTGGCATCTGACAGTGAAACAACTGGGGAGGATAAGTCGTTGCCTCTTCCTGAAATAGCGATTGGAATCGATATTGGCACCTCACAATGCAGTGTTGCTGTGTGGAATGGCTCCCAAGTGGATCTTTTGAAAAACAAAAGAAATCAGAAGCTTATGAAGTCATTTGTGACTTTCAAAGATGGATCTCCTTCTGGTGGAGTTACCAGTCAATTTTCCCACGAGCATGAGATGCTGTCTGGAGATACAATTTTCAACATGAAACGCTTGATTGGCAGAGTTGATACTGACCCAGTAGTACATGCAAGTAAAAATCTCCCATTTCTGGTGCAAACCTTGGACATCGGCGTTCGCCCCTTTATTGCTGCATTAGTGAACAATGTTTGGAGATCCACCAGTCCAGAAGAAGTCCTTGCAATGTTTCTTGTGGAGTTACGACTGATGACTGAAACTCATCTCAAAAGGCCAATAAGAAATGTAGTACTTACTGTTCCGGTTTCATTCAGTCGTTTCCAGCTGACCCGCTTAGAGCGTGCTTGTGCGATGGCTGGTCTTCATGTTCTCAGGTTGATGCCTGAACCAACAGCAGTGGCATTGTTGTATGGACAGCAACAACAGAAAGCTTCTGAAGAAACTATGGGCAGTGGAAGTGAAAAAATTGCTCTCATTTTCAATATGGGTGCTGGTTATTGTGATGTTGCTGTGACTGCTACCGCCGGAGGAGTATCCCAGATAAAAGCCTTGGCAGGAAGTACCATCGGTGGAGAAGATTTGCTTCAGAATATGATGCGTCATCTCTTACCGGATTCTGAAAATATATTCAAGCGTCATGGGGTTGAAGAAATCAAATCAATGGCATTGCTTCGAGTTGCAACCCAGGATGCAATTCATCAGCTTTCCTCCCAAACCAGTGTTCAGGTTGATGTAGATTTGGGAGATGGTTTGAAGATATGCAAGGTTGTTGACAGGACAGAGTTTGAGGAGGTAAACAAAGAGGTGTTTGAAAAGTGTGAAATCCTTATCATCCAATGCTTACATGATGCAAAGGTAGAAGTTAGGGATGTGAATGATGTGATACTTGTTGGTGGATGTTCTTATATCCCAAGGGTCGAGAATCTTGTTACCAACTTATGCAAAATAACAGAAGTTTATAAAGGTATAAATCCTTTGGAAGGTGCGGTTTGTGGTGCAGCAATGGAAGGAGCTGTTGCTTCAGGCATCAGTGATCCCTTTGGAAACTTGGACTTGTTAACAATTCAAGCCACTCCTCTTGCCATTGGAATTCGAGCTGATGGAAACAAGTTTGTACCTGTAATTCCGAGGAACACCACAATGCCTGCGCGTAAGGATCTACTCTTCACAACTATTCATGATAATCAAACTGAGGCATTGATACTTGTGTACGAAGGTGAAGGAAATAAGGCAGAAGAAAACCACTTGTTGGGATATTTCAAGATAATGGGAATACCTGCAGCACCAAAAGGAGTTCCTGAAATCAATGTGTGCATGGACATCGATGCTGCAAACGTGCTGAGAGTTTTAGCTGGTGTTGTGATGCCTGGATCCCGTACACCTGCAGTTCCTGTTATGGAAGTGAGGATGCCAATGGTTGATGATGGACATGGTTGGTGTGCTGAGGCCCTAAACAGAACCTACGGTGCCACAATGGATTTGGTTACCCTCAAGAAGACATAA 1728 0.4358 MIVMAEREPAYTVASDSETTGEDKSLPLPEIAIGIDIGTSQCSVAVWNGSQVDLLKNKRNQKLMKSFVTFKDGSPSGGVTSQFSHEHEMLSGDTIFNMKRLIGRVDTDPVVHASKNLPFLVQTLDIGVRPFIAALVNNVWRSTSPEEVLAMFLVELRLMTETHLKRPIRNVVLTVPVSFSRFQLTRLERACAMAGLHVLRLMPEPTAVALLYGQQQQKASEETMGSGSEKIALIFNMGAGYCDVAVTATAGGVSQIKALAGSTIGGEDLLQNMMRHLLPDSENIFKRHGVEEIKSMALLRVATQDAIHQLSSQTSVQVDVDLGDGLKICKVVDRTEFEEVNKEVFEKCEILIIQCLHDAKVEVRDVNDVILVGGCSYIPRVENLVTNLCKITEVYKGINPLEGAVCGAAMEGAVASGISDPFGNLDLLTIQATPLAIGIRADGNKFVPVIPRNTTMPARKDLLFTTIHDNQTEALILVYEGEGNKAEENHLLGYFKIMGIPAAPKGVPEINVCMDIDAANVLRVLAGVVMPGSRTPAVPVMEVRMPMVDDGHGWCAEALNRTYGATMDLVTLKKT* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0449 575 Gene3D - 96 151 - -
Mal6g0449 575 SUPERFAMILY Actin-like ATPase domain 228 414 IPR043129 -
Mal6g0449 575 MobiDBLite consensus disorder prediction 1 25 - -
Mal6g0449 575 PANTHER HEAT SHOCK PROTEIN 70KDA 9 574 IPR013126 GO:0005524|GO:0140662
Mal6g0449 575 Gene3D - 33 413 - -
Mal6g0449 575 PRINTS 70kDa heat shock protein signature 507 523 - -
Mal6g0449 575 PRINTS 70kDa heat shock protein signature 426 445 - -
Mal6g0449 575 PRINTS 70kDa heat shock protein signature 31 44 - -
Mal6g0449 575 PRINTS 70kDa heat shock protein signature 366 382 - -
Mal6g0449 575 PRINTS 70kDa heat shock protein signature 171 191 - -
Mal6g0449 575 PRINTS 70kDa heat shock protein signature 398 418 - -
Mal6g0449 575 CDD HSP70_NBD 33 413 - -
Mal6g0449 575 Gene3D Actin; Chain A, domain 4 266 347 - -
Mal6g0449 575 SUPERFAMILY Actin-like ATPase domain 31 215 IPR043129 -
Mal6g0449 575 Gene3D - 217 395 - -
Mal6g0449 575 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 428 533 IPR029047 -
Mal6g0449 575 Pfam Hsp70 protein 32 526 IPR013126 GO:0005524|GO:0140662
Mal6g0449 575 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 423 537 IPR029047 -
Mal6g0449 575 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 9 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0449 Mal-Chr6 5768492 5770320 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0449 32 526 Calmodulin-binding Proteins AT3G12580 38.538 6.54e-104 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0449 K09489 - gmx:100809773 985.326