Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0426 ATGAATAAAAATAATAATATGGATACACCAGAGAGGAACCAGATCAACACCACCCTCTCTAAATTCGAGGACTCACCAGTATTCAACTATATCAACAATTTATCTCCTATAAAGCCAGTTAAATCTGCTCACATTACCCAGACTTTCAATTCACTTAGCTTTTCATCCCCTCCATCCGTTTTCGCATCGCCTCATGTTACCTCTCTCAAGGAGTCTAGATTCCTCCGCAGACATAACCCACCGAGCGAATCAAAGCCTAAGGATTCATCTGAAGATGTAAATAAAGTGTACTCAAATGAAGAGGCTCTTGCAGAATCTAATCTTTCGCGTCATAACTCAGTTGAATTACATGAAAGTGCTGAGCAAGGGATTTCAGTAGGAGAAGATGCTTCTATTGAGCTATCTAGTGAACAAGCAAAGTTCTCCGATGAGCTACCACAGTCCTTACAGTATAATTGTGGTAGTCCTGGTTATGATCCTACACTTTGTGGTGATGAGGCTAACGCACTTTTGGAATTGTCTGGTGAAGCTGTATCGGATGTTGCTTATGTTCAGGAAGATGCGAATACAGATTCTGTTGAGGCTGAATTGCATCTTCAAGGAACGAGTCAGATCGATCCAAAGGGTGAAGGCTCAGACTGTGATTGGGATGGTTTAATTCCCAATGCTGCTAATATGTTAATTGAAGGAGAAGCTTTTAAGGGTCTGATGCAGAAATCATCGGGCTCTCCTATACGACTCAGCAATTTTGTGCCCCTGCTACAACAATGTACCAGCAACGATGATCAGAAAATTTACATGGTTGATTCAGTTGCTTCTGGTTCTGAACATGAAATTGAAAATCATTGTTCTGAGCTAGTTGCCGTGATTGACTCTGACCATATACAGGATAATCTTGCTAATGGTTCTTCGATGACTGGCAATCCAAATGAGAAAATGGATAATGAGCTTGTTTCTGTCACTCACCGTGGTATTCGGAGGCGCTGTCTTGACTTCGAGATGGCCAGTGTGCGAAGGAAGAACACAGATGATAATTCAAACACTGGCTCTAGTACACCACAGTCTGAGGTAATGAATGCTGCGAATGAAAAACAGCTGCTCCCTGCAAAACGCAATGCAAATTCACAAAGGTGCATTTTGCCGGGTATCGGTTTACACTTGAATGCTCTTGCTACCGTAAAGGATCAAAAAGGCATACAAATTGAAAATTTGACTTCTGGAAGACAACTCAGCCTGACCAGCTCTACATCCTTGCTGCTTTCTGCATGCCAAGAACATCAGCATCTATCGGTCGTATCTGTATCAATATCATCTGAACAAGAATTGGACCCATCTGACAATGGGGTTCAGCCTGCTGAAGATTGTCCCCAGCCACTAACTTACATGGTTGCTGAAGATTTCAATCAGAATAGCCCCAAAAAGAAAAGGCGTAAGTCAGAGCCAGTTGGAGAAACTGAGGGATGCAAACGTTGTAATTGCAAGAAATCAAAGTGCCTGAAGCTTTATTGTGAGTGTTTTGCTGCTGGTGTCTACTGCATAGAACCTTGCTCCTGTCAGGAGTGCTTCAACAAACCTATCCATGAAGATACTGTTCTTCAAACTCGCAAGCAAATTGAATCTCGCAACCCTCTTGCATTTGCTCCTAAAGTCATCCGAAATGCTGACTCTGTGCCTGAAACTGGGATTGACCCAAACAAAACTCCAGCTTCAGCACGCCATAAAAGAGGCTGCAACTGCAAGAAATCAAGCTGCCTAAAGAAATATTGTGAATGCTACCAGGGTGGTGTTGGTTGCTCCATTAGCTGCAGATGTGAAGGGTGCAAGAACGCCTTCGGTAGAAAGGACGGTTCTGCTTCTATAGGGATAGAAGGTGAGACAGAAGAAGAAACAGAAACAAGTGACAAGGGTGTGGAGGACAAAGCTATTCAAAAAACTGAAATTCAGATTATCGAAGATCATCCGGAGTCTGCTGGGGTCTCAACACCTTTACGGCTTTCCAGGCCGTCGCTTCCGATGCCCTTTTCATCAAAGGGAAAGCCACCAAGATCTTTCGTTACAACCATCACCGGTTCTGGATATTTTGCCAGCCAAAAGCTTGCTAAACCAAATTCTCTTTGGTCTCAATCTAAGACATTTCAGACTGTACCAGACGATGAAATGCCAGAAATCCTCCGTGGTGGTGATAGTTCTCCTACCGCGTGCATCAAAACTTCGTCTCCAAATGGCAAGAGGATCTCTTCTCCTAACTGTGAAATGGGATCGTCTCCTAGTCGCAGAGGTGGCAGGAAGTTGATATTACAATCTATTCCATCATTTCCTTCTCTCGCGCATAACCCTTAG 2340 0.4342 MNKNNNMDTPERNQINTTLSKFEDSPVFNYINNLSPIKPVKSAHITQTFNSLSFSSPPSVFASPHVTSLKESRFLRRHNPPSESKPKDSSEDVNKVYSNEEALAESNLSRHNSVELHESAEQGISVGEDASIELSSEQAKFSDELPQSLQYNCGSPGYDPTLCGDEANALLELSGEAVSDVAYVQEDANTDSVEAELHLQGTSQIDPKGEGSDCDWDGLIPNAANMLIEGEAFKGLMQKSSGSPIRLSNFVPLLQQCTSNDDQKIYMVDSVASGSEHEIENHCSELVAVIDSDHIQDNLANGSSMTGNPNEKMDNELVSVTHRGIRRRCLDFEMASVRRKNTDDNSNTGSSTPQSEVMNAANEKQLLPAKRNANSQRCILPGIGLHLNALATVKDQKGIQIENLTSGRQLSLTSSTSLLLSACQEHQHLSVVSVSISSEQELDPSDNGVQPAEDCPQPLTYMVAEDFNQNSPKKKRRKSEPVGETEGCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQECFNKPIHEDTVLQTRKQIESRNPLAFAPKVIRNADSVPETGIDPNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNAFGRKDGSASIGIEGETEEETETSDKGVEDKAIQKTEIQIIEDHPESAGVSTPLRLSRPSLPMPFSSKGKPPRSFVTTITGSGYFASQKLAKPNSLWSQSKTFQTVPDDEMPEILRGGDSSPTACIKTSSPNGKRISSPNCEMGSSPSRRGGRKLILQSIPSFPSLAHNP* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0426 779 MobiDBLite consensus disorder prediction 719 779 - -
Mal6g0426 779 MobiDBLite consensus disorder prediction 72 93 - -
Mal6g0426 779 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 7 776 IPR044522 GO:0003700
Mal6g0426 779 SMART CXC_2 486 527 IPR033467 -
Mal6g0426 779 SMART CXC_2 572 613 IPR033467 -
Mal6g0426 779 MobiDBLite consensus disorder prediction 336 358 - -
Mal6g0426 779 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 7 776 - -
Mal6g0426 779 MobiDBLite consensus disorder prediction 731 754 - -
Mal6g0426 779 MobiDBLite consensus disorder prediction 341 358 - -
Mal6g0426 779 MobiDBLite consensus disorder prediction 469 488 - -
Mal6g0426 779 MobiDBLite consensus disorder prediction 656 681 - -
Mal6g0426 779 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 575 610 IPR005172 -
Mal6g0426 779 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 489 524 IPR005172 -
Mal6g0426 779 ProSiteProfiles CRC domain profile. 487 612 IPR005172 -
Mal6g0426 779 MobiDBLite consensus disorder prediction 467 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0426 Mal-Chr6 5496311 5501161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0426 7 778 CPP Transcription Factor Family AT3G22780 43.284 4.10e-159 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Mal6g0426 TCR 1.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0426 - - mtr:MTR_5g006530 1344.72