Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0391 ATGGGGGATGGAAATGAAGAAGAAATCAAGTGGCCACCATGGTTGCAGCCACTTCTTCAAACAAGCTTCTTTGTTCAATGCAAAGTGCATGCAGATTCCAACAAAAGTGAATGCAATATGTATTGTTTGGACTGTATGAATGGAGCACTTTGTTCTTCTTGTCTAGCTTCTCATAAAGATCACAAAGCTATCCAGATAAGAAGGTCTTCATATCATGATGTGATAAGGGTATCTGAGATACAGAAGTTTTTGGACATAACAGGGATTCAAACATACGTTATAAACAGTGCAAAGATTGTGTTCTTGAATGAAAGGCCTCAGCCTAGGCCTGGCAAAGGAGTCACTAATATTTGCCAGGTCTGTGAACGAAGCCTTCTTGATTCATTCACCTACTGCTCCATTGGTTGTAAGATGCTTGGAACCTCCAAGCAATTCCAGAAGAAGAAAAAGTTAAGTGAGAGAGATGGGTTAGATGGTGAAGAATCAAATAGTAATGGAAGTGACAAAAACATAAACAAAATCCAGAGCTTTACACTGTCAACACCGCCACCTTACAGAATTCCTAAGAGGAGGAAGGGAGTCCCACGTAGAGCTCCAATGGGGGGAGGCCTTATTCCAGAATACTTATACAGTTATACTAATTAG 645 0.4047 MGDGNEEEIKWPPWLQPLLQTSFFVQCKVHADSNKSECNMYCLDCMNGALCSSCLASHKDHKAIQIRRSSYHDVIRVSEIQKFLDITGIQTYVINSAKIVFLNERPQPRPGKGVTNICQVCERSLLDSFTYCSIGCKMLGTSKQFQKKKKLSERDGLDGEESNSNGSDKNINKIQSFTLSTPPPYRIPKRRKGVPRRAPMGGGLIPEYLYSYTN* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0391 214 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 203 - -
Mal6g0391 214 Pfam PLATZ transcription factor 67 138 IPR006734 -
Mal6g0391 214 MobiDBLite consensus disorder prediction 163 182 - -
Mal6g0391 214 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 203 - -
Mal6g0391 214 MobiDBLite consensus disorder prediction 150 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0391 Mal-Chr6 5165571 5167650 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Mal6g0391 PLATZ 3.8e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0391 - - gmx:100796834 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2969 7 92926548 92928153 Mal6g0391 6 5165571 5167650 ECH
Mal6g0391 6 5165571 5167650 Mal6g0391 6 5165571 5167650 ECH