Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0385 ATGACTTCAGGTGTAGAAATGTCAAATGTGCAAGTAGATTCTGTTATGATTAGTTCAGATGATATAGTTGAAATCACTCAGGATGCAGACAATTCGAATGGTGAATCAGCAGTAGAGCCTTCTTTAGAGCCGTATGAAGGAATGGATTTTGCATCATTCGAAAATGCAAAAAATTACTATACAAGGTATGCAAGGAACAAAGGTTTTAGCTTTCGCTTGGGCCGTATTACTAAATCAAGAACAAATGGATTGATAATTGGTCAGGAGATTCTTTGTTCAAAGGAGGGATTTCGAGCTAAAAAGTATACAAAAGTTGCAAAACATGATGAAACAAGGGTAGGATGCAAGGCAATGATATATGTAAAGAAGAATGAAGATAGATGGATCATCTCTAGATTTATAAGAGATCATAATCATGAGCTTTTCTCCCCAAAAAGTTCACAATTTCTTCGAGTGCATAGAAAGAAAACTAAAGTGCAAAAAAAACTTATTGATGTACTCAAAGTGGTGGTATTGATAATGTTGGGTTTAGTCAACAAGACGTCATTGATTATTTAA 558 0.3441 MTSGVEMSNVQVDSVMISSDDIVEITQDADNSNGESAVEPSLEPYEGMDFASFENAKNYYTRYARNKGFSFRLGRITKSRTNGLIIGQEILCSKEGFRAKKYTKVAKHDETRVGCKAMIYVKKNEDRWIISRFIRDHNHELFSPKSSQFLRVHRKKTKVQKKLIDVLKVVVLIMLGLVNKTSLII* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0385 185 Pfam FAR1 DNA-binding domain 58 142 IPR004330 -
Mal6g0385 185 PANTHER OS07G0283300 PROTEIN 20 164 - -
Mal6g0385 185 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 20 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0385 Mal-Chr6 5138873 5140053 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal6g0385 FAR1 4.6e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0385 - - lang:109336948 180.644