Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0382 ATGATGAGAACACCAAGCAATGATGAAAGTGGTTTGAAGAAGGGTCCATGGAGTCCAGAAGAAGATAAAATATTAGTGGATCACATTCAGAAAAATGGTCATGGAAGTTGGAGAGCTCTTCCAAGGCTTGCAGGATTGAATAGATGTGGAAAGAGTTGTAGGCTAAGATGGAATAATTATCTAAGGCCTGATATTAGAAGAGGGAAATTTTCAGATGAAGAAGAGAATCTCATTATCAATTTACATTCAGTTCTTGGTAACAAGTGGGCAGCTATAGCAACACATCTTCCAGGAAGGACTGATAATGAAATAAAGAATTTTTGGAACACACATTTAAAGAAAAAGCTATTGCAAATGGGGTTAGATCCAGTGACACACAGGCCAAGAACAGATCACCTAGACCTTCTTAGCAATCTACAACAGATAATATTGAATGCTGCAAACATTGTCACCACTTGTGACATAAATAATGCTCTAAGGCTACAATATTCACTTCTACCACAAAATTTGATCAATGATGTTTTGGGATTTAATAATAATAACATACAAAACTTTTATGATGGTTCCACTTCCAATAGTTTTTCATCTCAAATATTTCAGCCTAATTTGCAAAATTTTGAAGCCCCTATTCCGCGATTTCCACAAGAATGTGGAGAGTATTCTCAGAAATTTGATGAACAAATTGATAACACAAATGTTGCTTCGACAATCTCATCGTCAAATTTGCTTCCAAAGCTGGTTTCAGTTTCGCCTCAACGTTCACCAACGGTTAAGGTAGGCGAAGAAAACATGATGATAAATGCAAAAGATCAGTGTTGTAACACTTCTTCTTCCACCAGTTTTGAAACTTGGGGAGATTTCATGAATGAGGATGCAAATGATGCTTACTGGAAAGATTTCATTGAACAACATTCAAGCCAGCCATAG 927 0.3646 MMRTPSNDESGLKKGPWSPEEDKILVDHIQKNGHGSWRALPRLAGLNRCGKSCRLRWNNYLRPDIRRGKFSDEEENLIINLHSVLGNKWAAIATHLPGRTDNEIKNFWNTHLKKKLLQMGLDPVTHRPRTDHLDLLSNLQQIILNAANIVTTCDINNALRLQYSLLPQNLINDVLGFNNNNIQNFYDGSTSNSFSSQIFQPNLQNFEAPIPRFPQECGEYSQKFDEQIDNTNVASTISSSNLLPKLVSVSPQRSPTVKVGEENMMINAKDQCCNTSSSTSFETWGDFMNEDANDAYWKDFIEQHSSQP* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0382 308 CDD SANT 69 112 IPR001005 -
Mal6g0382 308 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mal6g0382 308 PANTHER MYB TRANSCRIPTION FACTOR 2 304 - -
Mal6g0382 308 CDD SANT 16 61 IPR001005 -
Mal6g0382 308 Gene3D - 11 67 - -
Mal6g0382 308 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mal6g0382 308 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mal6g0382 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mal6g0382 308 SMART sant 66 114 IPR001005 -
Mal6g0382 308 SMART sant 13 63 IPR001005 -
Mal6g0382 308 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 304 - -
Mal6g0382 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mal6g0382 308 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mal6g0382 308 Gene3D - 69 116 - -
Mal6g0382 308 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0382 Mal-Chr6 5103724 5106465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0382 1 308 MYB Transcription Factor Family AT3G02940 48.101 2.46e-95 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal6g0382 Myb_DNA-binding 2.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0382 K09422 - gmx:102660452 360.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2963 7 92856754 92858250 Mal6g0382 6 5103724 5106465 ECH
Mal6g0382 6 5103724 5106465 Mal6g0382 6 5103724 5106465 ECH