Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0366 ATGTTGTCAGTAGCTCCTTCTGTTGATGCCAAACAGACCACAGAAGTGTCTACTTCTGTACCAAAGCTTGAACAAATTCACCAACAAAAACAAACAACTTGTGATTTTGATGACGATTCTATTTCTCTTTCTTCTCAAACTACTCATATATTTCAATCAAAATTACCAGATATACCAATTTCTAACCACCTCCCACTTCACACCTACTGCTTCGAAAAACTCTCCGAATTCGCTGATCGTCCTTGTCTCATCGTCGCCTCCACCGGAAAAACATACACCTACGCCGAAACCTATCTCCAATGCCGAAAAATCGCAGCCGGATTATCCAAATTAGGCATCCAGAAAGGCGATGTAATTATGATTCTCCTCCAAAACTCAGCCGAATTCGTTCTCTCCTTCATCGCGGCCTCAATGATTGGCGCGATCGCAACCACCGCGAATCCATTCTACACCAGCGCTGAGATCTTCAAACAAATAAAAGCTTCCAACACAAAAATCATCATCACACAAGCAATGTACGTTGATAAACTCAATCAAAACGAAGCGAAGGTTGAGGAATTTGACTTCAAAGTGATCACCATCGACGAACCACCGGTGAATTGTCTACATTTCTCAGTGATTTCTGAGGGAAAAGAAGATGAAGCACCAGAAGTTGAGATCGATCCGGAAGATGCGGTGGCGCTTCCATTTTCATCCGGAACAACCGGATTACCAAAAGGAGTGATTCTAACACACAAAAGTTTAACAACAAGTGTAGCACAACAAGTTGATGGAGAGAATCCGAATCTGTATTTAACAACAGAAGATGTTCTTCTTTGTGTTCTTCCATTGTTTCATATATTTTCTCTCAACAGTGTGCTATTGTGCGCGTTGAGAGCAGGGAGTGGGGTTCTGTTGATGCATAAATTTGAGATCGGAACTTTGCTTGGTCTTATACAGAAACATAAGGTGACGGTGGCGATGGTGGTGCCGCCGCTGGTTTTGGCGTTGGCGAAGAATCCGACGGTGGCGGAGTTTGATCTTAGCTCGATAAGGTTGGTGTTGTCCGGAGCTGCGCCGTTAGGGAAGGAGCTTGAAGAGACTCTCCATAATAGAATTCCTCAAGCTGTTTTGGGACAGGGGTACGGTATGACAGAGGCTGGCCCAGTACTTTCCATGTCTTTGGGCTTTGCAAAGAACCCATTCCCTACAAGTTCAGGTTCATGTGGCACTGTTGTAAGAAATGCTGAGCTCAAAGTTCTTGACTCTGAAACTGGTCGTTCTCTTGGTTATAATCAACCTGGTGAAATTTGCATACGTGGCCAACAAATCATGAAAGGATATTTGAATGATGAGAATGCAACAAAAGCTACTATTGATGAGGAGGGTTGGCTTCATACTGGGGATGTTGGCTATATAGATGACAATGATGAGATTTTCATAGTTGACAGGGTGAAAGAACTCATCAAATTCAAAGGGTTCCAAGTGCCCCCTGCTGAACTTGAAGGTCTTCTTGTAAGCCATCCATCTATTGCAGATGCAGCTGTTGTCCCGCAAAAGGATGTTGCTGCTGGTGAAGTTCCTGTTGCATTTGTGGTAAGATCAAATGGAAATGATCTAACTGAAGAGGTTGTTAAGGAGTTCATATCTAAACAGGTGGTGTTTTATAAAAGACTGCACAAAGTATATTTTATTCATGCAATTCCAAAGTCTCCTGCAGGAAAGATATTGAGGAAAGATCTGAGAGCAAAGCTAGAAAGTTCCACCCAAATGCCTTAG 1758 0.4289 MLSVAPSVDAKQTTEVSTSVPKLEQIHQQKQTTCDFDDDSISLSSQTTHIFQSKLPDIPISNHLPLHTYCFEKLSEFADRPCLIVASTGKTYTYAETYLQCRKIAAGLSKLGIQKGDVIMILLQNSAEFVLSFIAASMIGAIATTANPFYTSAEIFKQIKASNTKIIITQAMYVDKLNQNEAKVEEFDFKVITIDEPPVNCLHFSVISEGKEDEAPEVEIDPEDAVALPFSSGTTGLPKGVILTHKSLTTSVAQQVDGENPNLYLTTEDVLLCVLPLFHIFSLNSVLLCALRAGSGVLLMHKFEIGTLLGLIQKHKVTVAMVVPPLVLALAKNPTVAEFDLSSIRLVLSGAAPLGKELEETLHNRIPQAVLGQGYGMTEAGPVLSMSLGFAKNPFPTSSGSCGTVVRNAELKVLDSETGRSLGYNQPGEICIRGQQIMKGYLNDENATKATIDEEGWLHTGDVGYIDDNDEIFIVDRVKELIKFKGFQVPPAELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSNGNDLTEEVVKEFISKQVVFYKRLHKVYFIHAIPKSPAGKILRKDLRAKLESSTQMP* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0366 585 PANTHER 4-COUMARATE--COA LIGASE 3 49 577 - -
Mal6g0366 585 Gene3D - 479 582 IPR045851 -
Mal6g0366 585 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 49 577 - -
Mal6g0366 585 SUPERFAMILY Acetyl-CoA synthetase-like 50 580 - -
Mal6g0366 585 ProSitePatterns Putative AMP-binding domain signature. 228 239 IPR020845 -
Mal6g0366 585 Gene3D - 42 478 IPR042099 -
Mal6g0366 585 Pfam AMP-binding enzyme 74 484 IPR000873 -
Mal6g0366 585 Pfam AMP-binding enzyme C-terminal domain 493 568 IPR025110 -
Mal6g0366 585 CDD 4CL 60 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0366 Mal-Chr6 4843746 4849286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0366 25 491 Monolignol Biosynthesis Gene Families AT1G65060 70.913 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0366 K01904 - gmx:547492 910.598
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0366 6 4843746 4849286 Mal6g0366 6 4843746 4849286 ECH