Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0354 ATGATGAGGTTGAAGACATATGCTGGTCTTAGTTTGATGGCAACTTTGGCCATTGCATACCATGCATTTAACAGTAGAGGCCAGTTTTATCCGGCAATGGTGTATCTTTCAACATCCAAGATCAGTTTGGTGCTTCTTCTCAACATGGGTTTGGTTATTATGTGTGTTCTATGGCAACTAACAAAAAAAGTATTCTTGGGTAATCTTCGAGAGGCCGAGGTTGAGAGGCTTAATGAGCAATCATGGAGGGAGGTTATGGAGATCCTCTTTGCGATTACGATTTTTAGGCAGGACTTCTCAGTTACGTTCCTTGGGATGGTCACAGCATTGTTGTTAATTAAGGCTTTGCATTGGTTGGCTCAAAAGAGAGTCGAGTACATTGAGACCACTCCTACGGTGACCACGTTGTCTCATATTCGAATTGTATCTTTTATGGGTTTCCTTCTTCTGCTAGATAGCATTTTCTTATACAACTCTTTGAAGCATTTGATAGAAACATGGCAGGCTTCCGTTTCTCTGTTCTTTGCTTTTGAGTACATGATACTAGCAACAACAACAGTAGCAATTTTTGTAAAATATGTTTTCTATGTCACTGACATAATTATGGAGGGACAGTGGGAAAAGAAACCAGTCTTCACATTTTACCTGGACCTTGTTAGGGACTTGCTGCACTTGTCCATGTATCTGTGCTTCTTCTTTGTTATTTTTGTAAACTACGGTATTCCCTTGCACCTAATACGGGAGCTGTACGAGACATTTAGGAACTTCAAAGTTCGCATTGCAGATTACATTAGATATCGTAAGATCACTTCAAATATGAATGATCGCTTTCCAGATGCAACCCCTGAAGAGCTCAATGCTAGTGATGCAACTTGTATTATCTGTCGTGAAGAGATGACTACAGCCAAGAAACTGATATGTGGACACCTTTTTCACGTTCATTGCCTTCGATCATGGCTAGAGCGACAGCACACTTGCCCTACCTGCAGAGCCTTGGTTGTACCACCAGAAAATGGAACAACTGTTGCTGGAGGTCAGCAAGGAACACAATCAGATGGTCATCGACAGGGCACTGGAAGTACAGGTCAAACCGAGCTTGGCAGTGGGGTGGCAACTGATAGTTTGAGTCGGCATCAAGCTAGACTCCAAGCAGCTGCTGCTGCAGCTTCAATATATGAGAAGTCTTATGTGTATCCCTCTGCAACTTCTTTTGTACGATCTCCTGGGTACACTACTTATCCCCCGGTTGGTGAATCTTCCAGTGTTGATCTTAATGGAGAGCAAGCTTCCAGTCAACAAGCACAAAATCAGTTTCATATCCCTGGTGGGCCAACAAATGTACCCTTTCCTCCAATGGGACACTTCCATTTTCTTCCTTCCCAACCACACATGGCCCCTTTGAATTATGGAGAGGGGTTTGGAAATGATCGAAATATCTCCAAGTCTCAGTTGGAAGCTCATAAAAAATTTCTGCAACAACAGATTGAGAATCTGCAAAATCAGCTACAGAATCTGCAGAACACTGATGCCGAGAGAAGTGCAGATGACGGCACACCATCATCAGAAAGCAGAGGCAAGCTTAGCACTTCCATGGAGATTCAAGATGGAAAAGCATAA 1617 0.4286 MMRLKTYAGLSLMATLAIAYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCVLWQLTKKVFLGNLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLGMVTALLLIKALHWLAQKRVEYIETTPTVTTLSHIRIVSFMGFLLLLDSIFLYNSLKHLIETWQASVSLFFAFEYMILATTTVAIFVKYVFYVTDIIMEGQWEKKPVFTFYLDLVRDLLHLSMYLCFFFVIFVNYGIPLHLIRELYETFRNFKVRIADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTTVAGGQQGTQSDGHRQGTGSTGQTELGSGVATDSLSRHQARLQAAAAAASIYEKSYVYPSATSFVRSPGYTTYPPVGESSSVDLNGEQASSQQAQNQFHIPGGPTNVPFPPMGHFHFLPSQPHMAPLNYGEGFGNDRNISKSQLEAHKKFLQQQIENLQNQLQNLQNTDAERSADDGTPSSESRGKLSTSMEIQDGKA* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0354 538 SMART ring_2 292 329 IPR001841 -
Mal6g0354 538 SUPERFAMILY RING/U-box 272 336 - -
Mal6g0354 538 ProSiteProfiles Zinc finger RING-type profile. 292 330 IPR001841 -
Mal6g0354 538 MobiDBLite consensus disorder prediction 501 530 - -
Mal6g0354 538 Coils Coil 481 515 - -
Mal6g0354 538 MobiDBLite consensus disorder prediction 340 373 - -
Mal6g0354 538 CDD RING-H2_synoviolin 289 330 - -
Mal6g0354 538 PANTHER - 1 457 - -
Mal6g0354 538 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 264 337 IPR013083 -
Mal6g0354 538 Pfam Ring finger domain 291 330 IPR001841 -
Mal6g0354 538 PANTHER RING ZINC FINGER PROTEIN 1 457 - -
Mal6g0354 538 MobiDBLite consensus disorder prediction 501 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0354 Mal-Chr6 4771403 4775246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0354 1 526 C3H Transcription Factor Family AT3G16090 65.472 0.0 676
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0354 6 4771403 4775246 Mal6g0354 6 4771403 4775246 ECH