Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0344 ATGGGGACAAGAAATTTTGTATGGAATGTTACTAAAAAATTAGCAACATTTGGTCTCATTACTTTCACTATCTCTGATCGTTATGCCACTGTTCTTCCTGTTCGTGGTGCTTCTATGTCTCCCACTTTCAATCCCAAAACTAATTCTTTCACAGATGATTATGTCTTGGTTGAGAAATTTTGCCTTGATAGGTTCAAGTTTTCGCATGGTGATATTGTCATCTTTCGTTCCCCATCGGATTTTAAGGAGACACACATAAAGAGAATAATTGCATTACCTGGTGATTGGTTTGTTAGTCGGCATGACCAGGAGGTACGGCAGATTCCAGAAGGGCATTGTTGGGTCGAGGGAGATAATGCAGCTTCTAGCACAGATTCAAAATCATATGGACCTGTTCCTTTGGGTCTAGTACGAGGAAGGGTTACCCATGTTGTGTGGCCTCCTCATAGAATAGGAGCTGTCAAGAATACTAAACCAGAACGATTACCTTCTTCATAG 498 0.4096 MGTRNFVWNVTKKLATFGLITFTISDRYATVLPVRGASMSPTFNPKTNSFTDDYVLVEKFCLDRFKFSHGDIVIFRSPSDFKETHIKRIIALPGDWFVSRHDQEVRQIPEGHCWVEGDNAASSTDSKSYGPVPLGLVRGRVTHVVWPPHRIGAVKNTKPERLPSS* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0344 165 PRINTS Bacterial leader peptidase 1 (S26A) family signature 85 97 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mal6g0344 165 PRINTS Bacterial leader peptidase 1 (S26A) family signature 108 127 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mal6g0344 165 PRINTS Bacterial leader peptidase 1 (S26A) family signature 27 43 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mal6g0344 165 CDD S26_SPase_I 34 141 IPR019533 GO:0004252|GO:0006465
Mal6g0344 165 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 1 161 IPR037730 GO:0006465|GO:0006627|GO:0008236|GO:0042720
Mal6g0344 165 TIGRFAM sigpep_I_bact: signal peptidase I 19 102 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mal6g0344 165 Pfam Signal peptidase, peptidase S26 11 103 IPR019533 GO:0004252|GO:0006465
Mal6g0344 165 SUPERFAMILY LexA/Signal peptidase 31 154 IPR036286 -
Mal6g0344 165 Gene3D Umud Fragment, subunit A 27 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0344 Mal-Chr6 4609516 4611428 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0344 39 157 MADS-box Gene Family AT1G29960 40.800 3.77e-20 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0344 K09648 - jre:108994909 248.054