Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0326 ATGGCATCTGAAGCCTCTAGCATCTCTGCCACTACAAAAGATCAAGGTGAATCTCCCCACACAAAAAAAGTTGCGAACATGAAACAACTCGAACAAGATCCATCCCCAAACTCAAATTCCAACAAACCTATTGATTCCATGACGCTATCTAAAGACGATTCCATGTCCAAGGTGCCAGAGCACAAGGATTCAAGGTCTTTTTCATGCTTATATTGCAAGGGAAAATTTTCTACTTCCCAGGCGTTAGGTGGACACCAAAACGCTCATAAGGCAGAACGGGCATTAGAAAAGCAACGTAAACAAAGGTATGAATTAGGTTTAGGGCAGCCTCACCTTAACCCTTATTTTAGTTATCCAAATACTCTGTTTACACCTCATTATTATAGGGCACTCGGTGTTAGAGCGGAATCTATGATTCAAAAACCATCTTATATTAATCCTAAGATTACCCCACATAGTTTTGGTCCTTTTGAGAATAGTAATGGTACTTTGCATTTGAAAGAGACATTAAATCCTTCTCTTGTTAGTTTGAGAAATATGGAGGGTAGTAGTGGAGTTGGAATTCTAGGATTTGGTGGTGCAACTTCTTCAAAAATTGGTGGCTCTTTAGGGTATGGTAATGGTGCTTTGCGTTTGAAAGATCTATTAAACCATTCTCTTGTTAGTTTGAGAGATATGGATGGTAGTAATAGTAATAGTGGGGTTGAATGTCTAGGATTTAGTGGTGCAACTACTTCAAGGATTGAAGATTGTATGAATAACAAAACTGATGCTATTATAAAATTTGGAGATTCTTCTACGAACGTTGCTACAAGTTCAAACACAATCATAGACAATAAAAATAGTGTGGATCCTACTTCTACCAAGGATGATATTGATCGGTCGAAGTCCAACACTGAAGAAGAGTCCTCCAATTTTGATTCTTGTGGGCTTGATTTGTCACTTAGGCTTTAA 954 0.3816 MASEASSISATTKDQGESPHTKKVANMKQLEQDPSPNSNSNKPIDSMTLSKDDSMSKVPEHKDSRSFSCLYCKGKFSTSQALGGHQNAHKAERALEKQRKQRYELGLGQPHLNPYFSYPNTLFTPHYYRALGVRAESMIQKPSYINPKITPHSFGPFENSNGTLHLKETLNPSLVSLRNMEGSSGVGILGFGGATSSKIGGSLGYGNGALRLKDLLNHSLVSLRDMDGSNSNSGVECLGFSGATTSRIEDCMNNKTDAIIKFGDSSTNVATSSNTIIDNKNSVDPTSTKDDIDRSKSNTEEESSNFDSCGLDLSLRL* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0326 317 MobiDBLite consensus disorder prediction 276 317 - -
Mal6g0326 317 ProSitePatterns Zinc finger C2H2 type domain signature. 69 89 IPR013087 -
Mal6g0326 317 Gene3D Classic Zinc Finger 44 109 - -
Mal6g0326 317 MobiDBLite consensus disorder prediction 1 15 - -
Mal6g0326 317 MobiDBLite consensus disorder prediction 284 301 - -
Mal6g0326 317 PANTHER ZINC FINGER PROTEIN KNUCKLES 42 317 - -
Mal6g0326 317 ProSiteProfiles Zinc finger C2H2 type domain profile. 67 94 IPR013087 -
Mal6g0326 317 PANTHER ZINC FINGER PROTEIN JAGGED 42 317 IPR045320 GO:0003700
Mal6g0326 317 MobiDBLite consensus disorder prediction 1 61 - -
Mal6g0326 317 MobiDBLite consensus disorder prediction 28 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0326 Mal-Chr6 4415909 4416862 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0326 64 119 C2H2 Transcription Factor Family AT5G01860 57.143 1.96e-14 69.3