Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0324 ATGGCATCTAAAGCTTCTAGCATCTCTGCCACTACACAAGATCAACGTGAATCTTCCCACACAAAAAAAGGTGTGAACATGAAGGAGCTCGAACAAGATCCACCCTCAAACTCAAATTCCAACAAGCCTATTGATTTCATGAAGCTATCAAAAGATGATTCGATTCGCAGATCGAAGTTGCCAGAGCACGATTTTTTTAGCACTATGCAAGTTGGTTCAACATCTGGTTTTCCAAATAACAACAAAGAGGGGAAAGATGAGAACAAGAATGAAGAGAAAAATTTGGATTCAAGGTCTTTTTCATGTTTATTTTGCAGGAGAAAATTTGCTACTTCACAGGCGTTGGGAGGACACCAAAATGCGCATAAGGCGGAACGTGCATTAGAAAAGCAACGTAAACAAAGGTATGAATTAGGTTTAGGGCAGCCACAATTTAACCCTTATTTTAGTTATCCGAATACTCTTTTTACACCCCCTTATTATAGGGCACTCGGTGTTAGAATGGAACCTATGATTCAAAAACCATCGTATATTAACCCTAGGATTACCCCACATATTTTTCGCCCTTTTGAGTATAGTAATGGTGCTTTGCATTTGAATGAGATGCTAAACCCGTCTCTTGTTAGTTTGAGAAATATGGAGGGTAGTAATAGTAATTGTGAGGTTGGAAATTTAGGATTTGGTGGTGCAACTACTTCAAGGATTGAAGATGGTACAAATAATAAAATTTGTACCATCTACAAATTTGGAGATTCATCTACAAATGTTGCTACAAGTTCAAACTCAGTCATAGACAATAAAAATAGTGTAGATCTTACCTCTATTAAGGATGCTATTGATGAGCCGAAGTCCAACAATGAAGAAGAATCATCCAATGCTGAATCTTGTGAGCTTGATTTGTCACTTAAGCTCTAA 915 0.3749 MASKASSISATTQDQRESSHTKKGVNMKELEQDPPSNSNSNKPIDFMKLSKDDSIRRSKLPEHDFFSTMQVGSTSGFPNNNKEGKDENKNEEKNLDSRSFSCLFCRRKFATSQALGGHQNAHKAERALEKQRKQRYELGLGQPQFNPYFSYPNTLFTPPYYRALGVRMEPMIQKPSYINPRITPHIFRPFEYSNGALHLNEMLNPSLVSLRNMEGSNSNCEVGNLGFGGATTSRIEDGTNNKICTIYKFGDSSTNVATSSNSVIDNKNSVDLTSIKDAIDEPKSNNEEESSNAESCELDLSLKL* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0324 304 Gene3D Classic Zinc Finger 81 143 - -
Mal6g0324 304 MobiDBLite consensus disorder prediction 46 63 - -
Mal6g0324 304 MobiDBLite consensus disorder prediction 31 45 - -
Mal6g0324 304 PANTHER ZINC FINGER PROTEIN KNUCKLES 69 304 - -
Mal6g0324 304 MobiDBLite consensus disorder prediction 1 15 - -
Mal6g0324 304 MobiDBLite consensus disorder prediction 67 81 - -
Mal6g0324 304 ProSiteProfiles Zinc finger C2H2 type domain profile. 100 127 IPR013087 -
Mal6g0324 304 PANTHER ZINC FINGER PROTEIN JAGGED 69 304 IPR045320 GO:0003700
Mal6g0324 304 SUPERFAMILY beta-beta-alpha zinc fingers 97 128 IPR036236 -
Mal6g0324 304 MobiDBLite consensus disorder prediction 279 304 - -
Mal6g0324 304 ProSitePatterns Zinc finger C2H2 type domain signature. 102 122 IPR013087 -
Mal6g0324 304 MobiDBLite consensus disorder prediction 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0324 Mal-Chr6 4401892 4402806 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0324 89 174 C2H2 Transcription Factor Family AT5G01860 44.944 1.49e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0324 - - mtr:MTR_3g011970 339.347