Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal6g0299 | ATGCAAGGAAGCGCCGCCGACGGAGAAGCTTTGGATTTCGAGCCGGAGGAGGATGACTTGATGGACGAAGAAGGTGCTGTTGACGCCGAAGCTTCTCCTCCTCACCCCAAAATCAAATCCGCCATCACCGCTTCCACCCTCGCCGTTCCCAAAAAAACCAAAGGTCGCGGTTTCCGTCAGGATTCCGATTCCTCCAACCGTAACTCTCGTCTTGCTGATTCCGGTTTTGATACTCTAACTGCTGAGGGTGGTCCCGGTCCTCAAAGATCTATTGAAGGATGGATTATTTTGGTGACTGGTGTTCATGAAGAAGCTCAAGATGATGATTTGCAGAATGCTTTTGGTGAATATGGAGATATTAAGAATCTTCACTTGAATCTTGATCGCCGTACTGGTTTTGTTAAGGGTTATGCACTGATTGAATATGAGCGCTCTGAGGAAGCTCGGAATGCAATAGAGAATTTGAATGGATCTGTGCTTCTCACACAAACCATTTATGTTGATTGGGCTTTCAGCAGTGGACCTATTAACGAACCACCTCAGCGGCGCTCCAGGAGTCCTAGGAGGAGATATTGA | 576 | 0.4757 | MQGSAADGEALDFEPEEDDLMDEEGAVDAEASPPHPKIKSAITASTLAVPKKTKGRGFRQDSDSSNRNSRLADSGFDTLTAEGGPGPQRSIEGWIILVTGVHEEAQDDDLQNAFGEYGDIKNLHLNLDRRTGFVKGYALIEYERSEEARNAIENLNGSVLLTQTIYVDWAFSSGPINEPPQRRSRSPRRRY* | 192 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal6g0299 | 191 | CDD | RRM_RBM8 | 88 | 175 | IPR033744 | GO:0003729 | |
Mal6g0299 | 191 | SUPERFAMILY | RNA-binding domain, RBD | 87 | 190 | IPR035979 | GO:0003676 | |
Mal6g0299 | 191 | SMART | rrm1_1 | 95 | 168 | IPR000504 | GO:0003723 | |
Mal6g0299 | 191 | MobiDBLite | consensus disorder prediction | 10 | 26 | - | - | |
Mal6g0299 | 191 | PANTHER | RNA-BINDING PROTEIN Y14A-LIKE | 2 | 189 | - | - | |
Mal6g0299 | 191 | Gene3D | - | 11 | 183 | IPR012677 | - | |
Mal6g0299 | 191 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 96 | 165 | IPR000504 | GO:0003723 | |
Mal6g0299 | 191 | PANTHER | RNA-BINDING PROTEIN 8A | 2 | 189 | IPR008111 | GO:0003723|GO:0005634|GO:0005737|GO:0006396 | |
Mal6g0299 | 191 | PRINTS | RNA binding motif protein 8 family signature | 159 | 171 | IPR008111 | GO:0003723|GO:0005634|GO:0005737|GO:0006396 | |
Mal6g0299 | 191 | PRINTS | RNA binding motif protein 8 family signature | 85 | 99 | IPR008111 | GO:0003723|GO:0005634|GO:0005737|GO:0006396 | |
Mal6g0299 | 191 | PRINTS | RNA binding motif protein 8 family signature | 141 | 157 | IPR008111 | GO:0003723|GO:0005634|GO:0005737|GO:0006396 | |
Mal6g0299 | 191 | PRINTS | RNA binding motif protein 8 family signature | 47 | 59 | IPR008111 | GO:0003723|GO:0005634|GO:0005737|GO:0006396 | |
Mal6g0299 | 191 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 94 | 172 | IPR000504 | GO:0003723 | |
Mal6g0299 | 191 | MobiDBLite | consensus disorder prediction | 1 | 87 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal6g0299 | Mal-Chr6 | 4101852 | 4105062 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mal6g0299 | 96 | 170 | Eukaryotic Initiation Factors Gene Family | AT4G34110 | 37.333 | 3.43e-08 | 50.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mal6g0299 | K12876 | - | gmx:100778595 | 305.449 |