Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0285 ATGGAATCTATGTTTCAAGAAGAAGGGTCTTCATCAGTAACTTGTTCACCTCTACAGTTATTTTCCATGATGTCAGTTTCACCTAGCATAGGAGGAATAGGATCACCTTATCCATGGCTTAGTAGAGAATTGAAATCTGAGGAAAGGGGTTTGTGTTTGATCCATTTGTTAATCACTTGTGCAAACCATGTAGCTTCTGGTAGTCTTGAAAATGCAAACACAACACTTGAGCAGATTTCTCAGCTTGCAACTCCTGATGGAGATACTATGCAGAGAATTGCTGCTTATTTCACTGAAGCACTTGCTGATAGGATACTCAAAACTTGGCCTGGACTTCACAGAGCCTTAAATTCCACAAGAATTATTATGCTTTCTGAAGATATTATGGTTCAGAAGTACTTTTTTGAGCTTTTCCCTTTTTTGAAGGTTGCATATATTTTAACAAATCAAGCTATTGTTGAATCTATGGAAGGGGAAAAAATGGTTCATATAATTGATCTAAATGCTGCTGAACCTGCACAATGGATTGCTCTTCTTCAAGTTTTGAGTGCACGGCCCGAAGGTCCTCCTCATTTGAGAATCACAGGGATTCATCAGCAGAAAGAGGTTTTAGATCAGATGGCTCATAAGCTTTCTGAAGAAGCTGAAAAATTGGATATACCATTCCAATTCAATCCTGTTGTTAGCAAGCTAGAGAATCTTGATTTCGATAAACTTCGTGTGAAAACGGGTGAGGCGCTTGCAATTAGTTCTATTCTGCAATTACATTCCCTTTTGGCTTTGGATGATGAATTATCATCCTCAAGGAGAAAAACACCTATTCTGTCAAGAAACTCAAATGGACCTCACCTGCAAAAAGTCATGCTTATGAACCAAAACACATCATTAGGTGATTTGCTTGAAAAAGATATGGTCACTGGCTATAGTCCAAGTCCCGATTCAACATCATCGTCGTCGCCGGCATCTTCAACTGCTTCAATGAATGTGGAGAGTTTTCTCAATGCCTTGTGGAGTTTGTCGCCGAAAGTCATGGTTGTAACCGAACAAGACTCAAATCATAACGGTTCAACATTGATGGAGAGGCTGCTTGAAGCTCTATATTCTTATGCAGCATTGTTTGATTGTTTGGAATCAACTGTGTCAAGAACATCACTAGAGAGATTAAAGATTGAGAAGATGCTGTTTGGTGAGGAAATCAAGAACATAATTGCTTGTGAAGGAGCTGAAAGAAAGGAAAGACATGAAAAGCTTGATAAGTGGTTTATGAGACTAGATTTGTGTGGTTTTGGTAATGTGCCTTTAAGCTATTATGGTATGTTGCAGGCAAGGAGGTTTCTACAGAGTTATGGCTGTGAGGGATATAGAATGAGAGAAGAAAATGGTTGTGTAGTAACTTGCTGGCAGGATAGGTCTTTGTTTTCAACAACAGCTTGGAGAGCTAGGAAGTAA 1449 0.3906 MESMFQEEGSSSVTCSPLQLFSMMSVSPSIGGIGSPYPWLSRELKSEERGLCLIHLLITCANHVASGSLENANTTLEQISQLATPDGDTMQRIAAYFTEALADRILKTWPGLHRALNSTRIIMLSEDIMVQKYFFELFPFLKVAYILTNQAIVESMEGEKMVHIIDLNAAEPAQWIALLQVLSARPEGPPHLRITGIHQQKEVLDQMAHKLSEEAEKLDIPFQFNPVVSKLENLDFDKLRVKTGEALAISSILQLHSLLALDDELSSSRRKTPILSRNSNGPHLQKVMLMNQNTSLGDLLEKDMVTGYSPSPDSTSSSSPASSTASMNVESFLNALWSLSPKVMVVTEQDSNHNGSTLMERLLEALYSYAALFDCLESTVSRTSLERLKIEKMLFGEEIKNIIACEGAERKERHEKLDKWFMRLDLCGFGNVPLSYYGMLQARRFLQSYGCEGYRMREENGCVVTCWQDRSLFSTTAWRARK* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0285 482 PANTHER BNAA06G02820D PROTEIN 328 381 IPR030008 GO:0003700|GO:0005634|GO:0009739
Mal6g0285 482 PANTHER BNAA06G02820D PROTEIN 386 481 IPR030008 GO:0003700|GO:0005634|GO:0009739
Mal6g0285 482 PANTHER BNAA06G02820D PROTEIN 3 269 IPR030008 GO:0003700|GO:0005634|GO:0009739
Mal6g0285 482 MobiDBLite consensus disorder prediction 303 323 - -
Mal6g0285 482 ProSiteProfiles GRAS family profile. 44 479 IPR005202 -
Mal6g0285 482 Pfam GRAS domain family 53 479 IPR005202 -
Mal6g0285 482 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 386 481 IPR005202 -
Mal6g0285 482 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 328 381 IPR005202 -
Mal6g0285 482 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 3 269 IPR005202 -
Mal6g0285 482 MobiDBLite consensus disorder prediction 308 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0285 Mal-Chr6 3913171 3914619 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0285 1 482 GRAS Transcription Factor Family AT1G50420 66.531 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mal6g0285 GRAS 1.3e-138 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0285 - - tcc:18589932 712.605