Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0273 ATGGCTACCTTCAAAATTTATTTCTTGTTTTCCATAGTGGTCTTCTTGCTTCTTCACTCAACAAAAAGCACAACTCCAATTTGTGACAAGAGACATTGTGGAAACCCCGAGTTAGGACTTCTTATTGAGTTCCCTTTCCAATTAAGAGAAGAAAATCAAATTAACAACAATCAAAGTGATCGATGTGGGTACCCAGGGTTTGAAGTTTATTGCAACAATAGGAAGCAAGCTTTGATTACACTCTCAAATGCAAAATTTGTTGTCAAAAGTATTTCCCTTGAGAGACAAAGAATTTTGATCTACGGTCCCAATGATTGTCCACCAAGACGGTTCCTTCAAAACATAGATATGTACGATGATTCACCTTTCCTATTGGATCATAGTAATATTAATTATTATGAAAATGTAACATTTTTCAATTGTACCAATTTGGCAAAGGAACCAATATTTGGTGATCTACCTATTATACCTTGTCTAAGCAATGAAGAGTATACGATTATGTATGCGTTACAATTACCTCTTATTAATTCGTGGATTCATTCGTGTAATGAGATTGGATCTGCTATGGTTCCGGTCAAAAATAATTCTAGTCAACCAATGGAAATTTTTGATGGACTTCACTCTGATATAATCTTGAGGTGGAATACACCTCATTGTAATTGTGAAGCAGACCAATTTTGTGGCTTTGTAACAGATACGAGTCTTGATGTTACTTGTTACAATGACGACGGTCTATTTGATGGTCACCCAGGTGGAAATCCTCTAAAGCATAAAAAAATTTACTTTTTTCCAGTAGTATGGGGAATATCTGGAGTTCTGTTCTTCATATGGGTAATTTTATCAGTATGTAAAGATAGACAGCAAAACCATATCCCACAAACACAAATAATTACGAACATAGAACCAAGTAATCGGGAACCTCCTTGGTTTGTGTTTGGGCTTGATCATTCAAGGATAGAACAATATCCAAAGATTCAGCTAGCAGAAAGTGGACAATTGCCCAAGTCCATTGACAATGTTTGTTCCATATGTCTTAGTGAGTACAAACCTATGGAGACATTAAGGAGTATACCTCAATGTAATCATCATTTCCATGCCGATTGTATAGATGTATGGCTCAAGATGAATGCTACTTGCCCTTTATGTCGAAATTTGCCTGCGTAG 1164 0.36 MATFKIYFLFSIVVFLLLHSTKSTTPICDKRHCGNPELGLLIEFPFQLREENQINNNQSDRCGYPGFEVYCNNRKQALITLSNAKFVVKSISLERQRILIYGPNDCPPRRFLQNIDMYDDSPFLLDHSNINYYENVTFFNCTNLAKEPIFGDLPIIPCLSNEEYTIMYALQLPLINSWIHSCNEIGSAMVPVKNNSSQPMEIFDGLHSDIILRWNTPHCNCEADQFCGFVTDTSLDVTCYNDDGLFDGHPGGNPLKHKKIYFFPVVWGISGVLFFIWVILSVCKDRQQNHIPQTQIITNIEPSNREPPWFVFGLDHSRIEQYPKIQLAESGQLPKSIDNVCSICLSEYKPMETLRSIPQCNHHFHADCIDVWLKMNATCPLCRNLPA* 388
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0273 387 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 311 386 IPR013083 -
Mal6g0273 387 PANTHER RING-H2 FINGER PROTEIN ATL69-RELATED 9 386 - -
Mal6g0273 387 SUPERFAMILY RING/U-box 340 384 - -
Mal6g0273 387 SMART ring_2 341 382 IPR001841 -
Mal6g0273 387 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 9 386 - -
Mal6g0273 387 Pfam Wall-associated receptor kinase galacturonan-binding 28 100 IPR025287 GO:0030247
Mal6g0273 387 Pfam Ring finger domain 340 383 IPR001841 -
Mal6g0273 387 CDD RING-H2_PA-TM-RING 340 383 - -
Mal6g0273 387 ProSiteProfiles Zinc finger RING-type profile. 341 383 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mal6g0273 Mal-Chr6 3793854 3795970 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0273 28 387 C3H Transcription Factor Family AT2G46495 32.880 1.96e-45 157
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0273 - - mtr:MTR_5g009190 474.937