Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0267 ATGTCATATGTAACATCATCAGATTCTTGTAGTAAAAACAATAACATATGTAGTAGTACTAGGAAATTGTCAAATATTATGGATCATGATGATACTAATAATATTGTCGCCGACAATATTAATAATAAATCTAAAGAAATTGAGCGGCGTTACGATAATTATAGAAGGAAGAGAAAGCGTCCATGTAAAGTTGCGGTGGTTCCAACGATGGAATCAACCACTGGAGAAACCGCCACGGCGTCACACGGTTTTATATCGGTGATTGGGAGGCGGAGGGTGATGGAAGATGCTATCAAAGTGATTCCTCGTTTTGTGGCGGCGGAACAGCAACCGTGTGGTTATGATTTCTTTGCGGTTTATGACGGTCACGGTGGTATGACGGTGGCGAATGCTTGTCGTGATAGGTTGCACTTGTTGTTGGCGGAGGAAGTGAAGGAGGGACGTAGGAATCATGGATATTTGGATTGGTGTGAAGCTATGTGTTCTTGTTTTATGAAGATGGATCGTGAAATTGGAGTCGGTGGTGATGAGGTTGATGGGAATACGGTGGGTTCTACGGCGGCTGTGGTGGTGGTGGGGAAGGAGGAGATAGTTGTGGCGAATTGTGGTGACTCTAGGGCGGTGTTGTGTAGTGGCGGTGTAGCGGTGCCACTTTCACGTGATCATAAGCCAGATCTTCCGGATGAAAGAGAGAGGATTGAAGCAGCAGGTGGAAGAGTGATTGATTGGAATGGGAATCGCGTTTTAGGAGTTCTTGCTACATCCAGATCCATAGGGGATCATTGCATGAAGCCATTTGTGATATCTCAACCGGAGATAAACGTGTATGGACGAACAAAGTCAGATGAGTTTGTTGTCGTGGCAAGTGATGGTCTTTGGGATGTAGTATCAAATAATTTTGTTTGTGAAGTGGTTAAAAGTTGTCTCCAAGGTCATATGAGGAGGCACAATATAAAAGAAGATCTCACTATTAAAAGTTATGCTGCAGAAGCTGCGGCAATCTTAGCTGAATTGGCTATGGCTAAGGGAAGCAAAGACAACATCAGTGTTATAGTCATCCAGCTCAACACTAACATTTGA 1080 0.4361 MSYVTSSDSCSKNNNICSSTRKLSNIMDHDDTNNIVADNINNKSKEIERRYDNYRRKRKRPCKVAVVPTMESTTGETATASHGFISVIGRRRVMEDAIKVIPRFVAAEQQPCGYDFFAVYDGHGGMTVANACRDRLHLLLAEEVKEGRRNHGYLDWCEAMCSCFMKMDREIGVGGDEVDGNTVGSTAAVVVVGKEEIVVANCGDSRAVLCSGGVAVPLSRDHKPDLPDERERIEAAGGRVIDWNGNRVLGVLATSRSIGDHCMKPFVISQPEINVYGRTKSDEFVVVASDGLWDVVSNNFVCEVVKSCLQGHMRRHNIKEDLTIKSYAAEAAAILAELAMAKGSKDNISVIVIQLNTNI* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0267 359 Gene3D - 75 358 IPR036457 -
Mal6g0267 359 Coils Coil 37 57 - -
Mal6g0267 359 PANTHER ALPHABET, ISOFORM E-RELATED 45 357 - -
Mal6g0267 359 SUPERFAMILY PP2C-like 72 356 IPR036457 -
Mal6g0267 359 Pfam Protein phosphatase 2C 82 348 IPR001932 -
Mal6g0267 359 ProSiteProfiles PPM-type phosphatase domain profile. 81 355 IPR001932 -
Mal6g0267 359 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 45 357 - -
Mal6g0267 359 ProSitePatterns PPM-type phosphatase domain signature. 116 124 IPR000222 GO:0043169
Mal6g0267 359 CDD PP2Cc 81 355 IPR001932 -
Mal6g0267 359 SMART PP2C_4 71 353 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0267 Mal-Chr6 3682899 3684328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0267 64 355 PP2C-type Phosphatase Gene Family AT1G07430 42.985 3.59e-82 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0267 K14497 - gmx:100813248 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0267 6 3682899 3684328 Mal6g0267 6 3682899 3684328 ECH