Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0266 ATGGAAGGAATGCAAAACAGAGATATTGGATCATGTTTATCAAATCTCATATTATCAAGTTCAACAAACACACTTGACTCAATTTTCTCAGATATTCCATCAACAAACACCACCACAAACAACAACACCTTCTTGGGTTGTTCAAATTTTGAACCTTTAGGTTCCTCTGTTTACCTTCGCCAGAGAGATATTTTACAAAAATTCTACGAAGAAAGCCGATTAAACGGCTCATTCGTTCCATCTTCATTTTCAAATCAATCTCTACTAAACCCATCTTTATATACAACAAATTCAAGTTCAGTTTCAAGTACAAGTTCGTTCACTTCTTTGGTGAATCCTTGCAAGAAAAAGCTATACAGAGGAGTGAGACAGAGACACTGGGGAAAATGGGTAGCTGAGATTAGACTTCCTCAGAATAGAATGAGAGTTTGGCTTGGAACTTATGAAACTGCTGAAGCTGCAGCTTATGCTTATGATCGTGCAGCTTATAAGCTTCGCGGCGAATACGCTCGTTTGAATTTTCCAAATTTGAAAGATCCAACAAAGTTAGGTTTTGGTGATTCTACTAGATTGAATGCTTTGAAGAATTCTGTTGATGCTAAAATTCAAGCTATTTGTCAAAAGGTGAAAAGGGAAAAAGCTAAAAAGATTGCTGCTAAAAAGATGAAGAAGAATTCAGGTAGTGAAGCTGCAAAGAGTGATAAAAATTCAGAGAAGATTATTAATTCATCTTCTTGTTCTTCTTCTTCGTCTTCGTTACCGATTTCACCTATAACTTTTTGTGATGATTGGGTGAATGAATTGTTTTCACCAACTGTTTCTGAGGATGGAATTTGGAAAGGAGAGAATTCGCCGAATTCTGTTTCGACAATGGTGACAGAGGAAACAGAGTTTGAAGATTGTTCCTTAGCAAGGATGCCATCTTTTGATCCTGAATTGATTTGGGAAGTTCTTGCTATTTAG 963 0.3645 MEGMQNRDIGSCLSNLILSSSTNTLDSIFSDIPSTNTTTNNNTFLGCSNFEPLGSSVYLRQRDILQKFYEESRLNGSFVPSSFSNQSLLNPSLYTTNSSSVSSTSSFTSLVNPCKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYETAEAAAYAYDRAAYKLRGEYARLNFPNLKDPTKLGFGDSTRLNALKNSVDAKIQAICQKVKREKAKKIAAKKMKKNSGSEAAKSDKNSEKIINSSSCSSSSSSLPISPITFCDDWVNELFSPTVSEDGIWKGENSPNSVSTMVTEETEFEDCSLARMPSFDPELIWEVLAI* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0266 320 MobiDBLite consensus disorder prediction 237 253 - -
Mal6g0266 320 Pfam AP2 domain 119 168 IPR001471 GO:0003700|GO:0006355
Mal6g0266 320 MobiDBLite consensus disorder prediction 222 236 - -
Mal6g0266 320 MobiDBLite consensus disorder prediction 218 253 - -
Mal6g0266 320 Gene3D AP2/ERF domain 118 176 IPR036955 GO:0003700|GO:0006355
Mal6g0266 320 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 8 319 - -
Mal6g0266 320 CDD AP2 117 177 IPR001471 GO:0003700|GO:0006355
Mal6g0266 320 PRINTS Ethylene responsive element binding protein signature 141 157 IPR001471 GO:0003700|GO:0006355
Mal6g0266 320 PRINTS Ethylene responsive element binding protein signature 119 130 IPR001471 GO:0003700|GO:0006355
Mal6g0266 320 ProSiteProfiles AP2/ERF domain profile. 118 175 IPR001471 GO:0003700|GO:0006355
Mal6g0266 320 SUPERFAMILY DNA-binding domain 118 175 IPR016177 GO:0003677
Mal6g0266 320 SMART rav1_2 118 181 IPR001471 GO:0003700|GO:0006355
Mal6g0266 320 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 8 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0266 Mal-Chr6 3658436 3659398 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0266 8 319 AP2-EREBP Transcription Factor Family AT1G64380 49.085 3.78e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal6g0266 AP2 4.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0266 - - lja:Lj0g3v0046879.1 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0266 6 3658436 3659398 Mal6g0266 6 3658436 3659398 ECH