Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0249 ATGTGTCATTTTCTTCCAAACATTTTTCTGTTTTCAGTATACTTGATTGGTTTATTAGTATATCTAGGAAATGCAGAACCTGTTGAAGACAAAAAAGCATTGTTAGAGTTTGTTGAAAAATTACCTCATTTTAAAGTTTTGAATTGGAATGTCAATTCTTCAATTTGTACTAGTTGGAATGGTGTAATTTGTAGTGCAGATAGGTCTCAAATTATCGCGATTGGATTGCCTGGGTTTGGATTTAATGGCACAATTCCTCCTAATACAATTAGCAAAATCAAAGGGTTGCAAAAATTGAACCTTAGATCCAACAATTTCATAGGTCCATTACCGGATTTCGGTGTTTGGAAGAATCTATCTGTTGTTAATTTGTCTAATAACCGTTTCATTGGCGAAATTCCTTTATCTCTTTCCAATTTGAGTCACCTTGCTTGTTTGAATCTCGCAAACAACTCGCTTTCCGGTGAAATTCCTGATATAAACTTGCCTTTGTTGAAACAATTGAATTTGTCTAATAACAATTTGCAAGGGGTTGTTCCTGTTTCTCTTCGGAGGTTTCCTAAGTCAGCATTTGTTGGAAACAATGTTTCTATTAGTACATTGTCTCCGGTAACTCTACCGTGTTTGAAACATTGTTCTAAATCTGAGAAACATGGAAGGATTAGTGGTACATTAATGTTGGGAATTATTGTTGTTGGTGCTTTTCTATGCATTGCAGCATTCATTGTTTTTATCTTTGTGTTGTGTTCTAAGAGGAAGGATAGAGATGTTTTTGTTGGCAAGTTGGAGAAAGGAGGAAAAATGTCACCTGAAAAAGTGGTCTCAAGAAACCAAGATGCAAGCAATAAACTTTTTTTCTTTGAGGGATGTAACTATGCTTTTGATTTGGAGGATTTATTAAGGGCTTCTGCTGAAGTACTTGGTAAGGGAACATTTGGTGCTGCGTACAAGGCGGTACTAGAGGATGCAACCACAGTTGTTGTGAAGAGGTTAAAGGAGGTAGCTGTTGGGAAGAAGGAGTTTGAGCAACACATGGATATTGTTGGAAGTCTTAAACATGAGAATGTGGTTGACCTAAAGGCATATTACTATTCCAAAGATGAGAAACTGGTTGTGTATGACTACTTCAGTCAGGGTAGCATCTCTGCTTTGTTGCATGGTAAAAGAGGGGAGGACAAGGTGGCTTTAGATTGGAATACTCGGATCAAGATAGCTTTAGGTGCTGCACGAGGCCTTGCTCGTATCCACTCTGAGAATTGTGGGAAACTTATCCATGGCAATGTCAAATCCTCAAATATCTTTCTCAATACTAAACAATACGGCTGTATATCTGACCTTGGCTTGGCAATGATCATGAGCTCGGTCGGCCAGCCTATCTCGCGAGCAGCCGGTTACCGAGCACCTGAAGTTACAGACACCAGGAAAGCAACACAGGCTTCAGATGTTTACAGCTTTGGTGTGGTGTTACTAGAGCTTTTAACTGGGAAATCCCCTATCCACACAACTAGAGGCGATGAGATTGTCCACCTTGTGAGATGGGTTCATTCAGTTGTGAGAGAGGAATGGACAGCTGAAGTATTTGACTTAGAGCTTATGAGATGTCCAAATATAGAAGAAGAGATGGTGGAGATGTTACAGATAGCGATGTCATGTGTTGTAAGGATGCATGATCAAAGACCTACGATGTCAGAAATTGTAAAGATGATAGAAAATGTGAGGCAGATTGATATAGAGAATAAGCCATCATCTGAGAACCAAGCTGAAAGTGCAACACAACATCAATTCTCTCAACCTGAAAGTCTACCCCTTAACCAAGAAGGAGGAGAATTATCAAAAACTGCTTCATTTGAGTGTATCTGA 1860 0.3903 MCHFLPNIFLFSVYLIGLLVYLGNAEPVEDKKALLEFVEKLPHFKVLNWNVNSSICTSWNGVICSADRSQIIAIGLPGFGFNGTIPPNTISKIKGLQKLNLRSNNFIGPLPDFGVWKNLSVVNLSNNRFIGEIPLSLSNLSHLACLNLANNSLSGEIPDINLPLLKQLNLSNNNLQGVVPVSLRRFPKSAFVGNNVSISTLSPVTLPCLKHCSKSEKHGRISGTLMLGIIVVGAFLCIAAFIVFIFVLCSKRKDRDVFVGKLEKGGKMSPEKVVSRNQDASNKLFFFEGCNYAFDLEDLLRASAEVLGKGTFGAAYKAVLEDATTVVVKRLKEVAVGKKEFEQHMDIVGSLKHENVVDLKAYYYSKDEKLVVYDYFSQGSISALLHGKRGEDKVALDWNTRIKIALGAARGLARIHSENCGKLIHGNVKSSNIFLNTKQYGCISDLGLAMIMSSVGQPISRAAGYRAPEVTDTRKATQASDVYSFGVVLLELLTGKSPIHTTRGDEIVHLVRWVHSVVREEWTAEVFDLELMRCPNIEEEMVEMLQIAMSCVVRMHDQRPTMSEIVKMIENVRQIDIENKPSSENQAESATQHQFSQPESLPLNQEGGELSKTASFECI* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0249 619 SUPERFAMILY L domain-like 41 208 - -
Mal6g0249 619 SUPERFAMILY Protein kinase-like (PK-like) 305 579 IPR011009 -
Mal6g0249 619 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Mal6g0249 619 MobiDBLite consensus disorder prediction 582 611 - -
Mal6g0249 619 PANTHER PROTEIN, PUTATIVE-RELATED 22 585 - -
Mal6g0249 619 PANTHER OS05G0588300 PROTEIN 22 585 - -
Mal6g0249 619 Gene3D Transferase(Phosphotransferase) domain 1 376 597 - -
Mal6g0249 619 Gene3D Ribonuclease Inhibitor 28 203 IPR032675 -
Mal6g0249 619 Gene3D Phosphorylase Kinase; domain 1 267 375 - -
Mal6g0249 619 ProSitePatterns Protein kinases ATP-binding region signature. 307 338 IPR017441 GO:0005524
Mal6g0249 619 MobiDBLite consensus disorder prediction 582 619 - -
Mal6g0249 619 Pfam Protein kinase domain 304 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0249 619 ProSiteProfiles Protein kinase domain profile. 301 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0249 Mal-Chr6 3463713 3466112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0249 19 595 Receptor kinase-like Gene Family AT4G23740 58.106 0.0 698
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mal6g0249 Pkinase 4.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0249 - - gmx:100804799 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0249 6 3463713 3466112 Mal6g0249 6 3463713 3466112 ECH
Mal6g0249 6 3463713 3466112 Mal7g5008 7 119234614 119237297 PCT