Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0222 ATGATCATTACTGAGAAAAACCGTAGAGAGATCTCCAAATACCTCTTCCAAGAGGGAGTTTGCTTTGCAAAGAAGGATTTCAATTTGGCTAAGCACCCAGAAATCGATGTACCAAATTTGCAAGTGATTAAGCTGATGCAGAGCTTCAAATCAAGGGAATATGTGAGGGAAACTTTTGCTTGGCAATATTATTATTGGTTCCTCACCAATGATGGAATTGAGTTTCTCAGGACTTATCTCAATCTTCCATCTGAGATTGTCCCTGCTACTTTGAAGAAACAGGCTAAGCCAGCTGGAAGGCCTTTTGGTGGTCCTCCTGGTGATCGCCCTAGGGGCCCACCAAGATTTGAGGGTGAAAGGAGATTCGGTGGTGACCGTGATGGATACCGTGGAGGTCCCAGAGGGGAGTTTGGAGGTGACAAAGGTGGTGCTCCAGCTGACTACAGGCCTTCTTTCGGGGGTCCTGGAGGAAGACCTGGCTTTGGTCGTGGTTCTGGTGGCTTTGGAGCCCCAACTAGTTCTAATGATGCTTAA 534 0.4719 MIITEKNRREISKYLFQEGVCFAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWQYYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGERRFGGDRDGYRGGPRGEFGGDKGGAPADYRPSFGGPGGRPGFGRGSGGFGAPTSSNDA* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0222 177 MobiDBLite consensus disorder prediction 112 134 - -
Mal6g0222 177 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 175 - -
Mal6g0222 177 Pfam Plectin/S10 domain 3 94 IPR005326 -
Mal6g0222 177 PANTHER 40S RIBOSOMAL PROTEIN S10 1 175 IPR037447 -
Mal6g0222 177 MobiDBLite consensus disorder prediction 92 177 - -
Mal6g0222 177 Gene3D - 1 104 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0222 Mal-Chr6 3209679 3211891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0222 1 152 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 81.169 1.65e-72 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0222 K02947 - gmx:100500445 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0222 6 3209679 3211891 Mal6g0222 6 3209679 3211891 ECH
Mal6g0222 6 3209679 3211891 Mal7g4967 7 118539380 118541558 PCT