Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0221 ATGGGTAGCAAAAGCAAAGAAAATAATGATAGAGATTCAATTAAGAAGGTTTTGACTCACAAAGGTCGATATGTGCAATACAGTTTGTATGGAAACTTGTTTGAAGTGTCCTCCAAATATGTTCCTCCACTTCGCCCTATCGGTAGAGGCGCTTATGGCATCGTTTGTGCCGCTGTTAATTCCGATACACATGAGGAAGTTGCCATCAAGAAGATTGGAAATACATTTGACAACATTATTGATGCTAAAAGGACTTTGAGGGAAATTAAGCTTCTTTGTCACATGGACCATGAAAATATTATTGCTATTAAGGATATTATACGACCTCCGCAAAAGGATGCTTTTAATGATGTTTACATTGTTTATGAATTGATGGACACTGATCTTCATCAGATTATTCGTTCTAATCAACCTCTCAACCCTGACCATTGTCAGTACTTTCTATACCAGCTGTTAAGGGGACTGAAATACGTGCATTCGGCGAATGTCTTGCACCGTGATCTTAAACCAAGTAATTTACTTTTGAATGGAAACTGTGACCTTAAAATTGGGGACTTTGGTTTGGCAAGGACAACATCCGAAACAGATTTTATGACGGAGTATGTCGTTACTAGATGGTACAGAGCCCCGGAATTGCTCCTTAATTGTTCAGAGTACACATCTGCAATTGATGTTTGGTCTGTTGGTTGCATATTTGCTGAAATTATGACCAGAGAACCCTTGTTTCCTGGGAAAGATTATGTTCATCAACTAAGGCTTATAACCGAGTTAATAGGTTCACCTGATGATTCGAGCCTCGGATTTCTGCGAAGTGAAAACGCCAGAAGGTATCTTAGACAGCTTCCACAATTCGGGAAACAAAATCTTTCTGCGAAATTTCCTCGTATGTCGGCTGAGCCTCTGGACTTACTAGAAAAAATGCTTGTATTTGATCCTGATAAACGAATTACAGTTGATGAGGCACTATGTCATCCATATCTTTCATCACTTCATGACATCAATGATGAGCCAGTTACTCCTATGCCATTCAGTTTTGATTTTGAGCAGCCAGCATGTACTCAAGAGCACATTAAGGAACTCATCTGGAGGGAATCAGTGAATTTCAATCCCGATCCGCTGTCTTAG 1125 0.3964 MGSKSKENNDRDSIKKVLTHKGRYVQYSLYGNLFEVSSKYVPPLRPIGRGAYGIVCAAVNSDTHEEVAIKKIGNTFDNIIDAKRTLREIKLLCHMDHENIIAIKDIIRPPQKDAFNDVYIVYELMDTDLHQIIRSNQPLNPDHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNGNCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCIFAEIMTREPLFPGKDYVHQLRLITELIGSPDDSSLGFLRSENARRYLRQLPQFGKQNLSAKFPRMSAEPLDLLEKMLVFDPDKRITVDEALCHPYLSSLHDINDEPVTPMPFSFDFEQPACTQEHIKELIWRESVNFNPDPLS* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0221 374 Gene3D Transferase(Phosphotransferase) domain 1 125 354 - -
Mal6g0221 374 SUPERFAMILY Protein kinase-like (PK-like) 44 335 IPR011009 -
Mal6g0221 374 ProSitePatterns Protein kinases ATP-binding region signature. 47 71 IPR017441 GO:0005524
Mal6g0221 374 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11-RELATED 16 373 - -
Mal6g0221 374 ProSiteProfiles Protein kinase domain profile. 41 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0221 374 CDD STKc_TEY_MAPK 34 370 - -
Mal6g0221 374 SMART serkin_6 41 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0221 374 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 373 - -
Mal6g0221 374 ProSitePatterns MAP kinase signature. 76 179 IPR003527 GO:0004707|GO:0005524|GO:0006468
Mal6g0221 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Mal6g0221 374 Pfam Protein kinase domain 45 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0221 374 Gene3D Phosphorylase Kinase; domain 1 24 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0221 Mal-Chr6 3205482 3207583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0221 8 370 MAP Kinase Gene Family AT4G01370 82.645 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Mal6g0221 Pkinase 3.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0221 - - gmx:100803024 674.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0221 6 3205482 3207583 Mal6g0221 6 3205482 3207583 ECH
Mal6g0221 6 3205482 3207583 Mal7g4966 7 118533941 118536896 PCT