Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0210 ATGGAGAGGGAGGAAGATGTTAAGATTGGAGCAAACAAGTTCTCAGAAAAGAATGCATTAGGCACTGGAGCTCAGAGTGATAGTAAGGACTATAAGGAAGCACCACCAGCACCATTGTTTGAGCCAGGGGAGTTGAAGTCATGGTCATTTTATAGAGCTGGGATTGCTGAGTTTGTTGCAACTTTCTTGTTTCTTTACATTACTGTCTTAACTGTGATGGGTGTGAATAGGTCATCCTCTAAGTGTGCCTCTGTTGGTATTCAAGGAATTGCTTGGGCTTTTGGTGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGAATATCAGCTGTGACATTCGGTTTGTTTTTGGCTAGGAAGTTGTCGTTGACAAGAGCAGTATTCTACATAATAATGCAGTGTCTTGGAGCTATCTGTGGTGCTGGTGTAGTGAAGGGATTTGAGGGTAATGCTCGTTATGAGTTGTACAAAGGTGGAGCAAATGTTGTGAACCCTGGTTACACCAAGGGTGGTGGTCTTGGAGCTGAGATTGTTGGTACCTTTGTTCTTGTCTACACTGTCTTCTCTGCCACTGATGCCAAGAGAAATGCAAGAGACTCTCATGTTCCGATTTTGGCACCTCTTCCAATTGGGTTTGCTGTGTTTTTGGTTCACTTGGCTACTATTCCCATAACTGGAACTGGAATTAACCCAGCTAGGAGTCTTGGTGCTGCCATAATATATAACAGAGACCATGCTTGGGATGACCATTGGATTTTCTGGGTTGGACCTTTCATTGGAGCTGCACTTGCTGCTTTATATCACCAGATAGTGATCCGAGCAATTCCTTTCAAGTCAAGGGATTAA 846 0.4385 MEREEDVKIGANKFSEKNALGTGAQSDSKDYKEAPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITVLTVMGVNRSSSKCASVGIQGIAWAFGGMIFALVYCTAGISAVTFGLFLARKLSLTRAVFYIIMQCLGAICGAGVVKGFEGNARYELYKGGANVVNPGYTKGGGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWDDHWIFWVGPFIGAALAALYHQIVIRAIPFKSRD* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0210 281 MobiDBLite consensus disorder prediction 1 35 - -
Mal6g0210 281 SUPERFAMILY Aquaporin-like 44 273 IPR023271 -
Mal6g0210 281 PANTHER AQUAPORIN PIP1-2-RELATED 3 280 - -
Mal6g0210 281 Pfam Major intrinsic protein 44 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal6g0210 281 Gene3D Glycerol uptake facilitator protein. 37 279 IPR023271 -
Mal6g0210 281 PRINTS Major intrinsic protein family signature 251 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal6g0210 281 PRINTS Major intrinsic protein family signature 125 144 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal6g0210 281 PRINTS Major intrinsic protein family signature 175 193 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal6g0210 281 PRINTS Major intrinsic protein family signature 52 71 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal6g0210 281 PRINTS Major intrinsic protein family signature 211 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal6g0210 281 CDD MIP 52 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal6g0210 281 TIGRFAM MIP: MIP family channel proteins 56 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal6g0210 281 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 3 280 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0210 Mal-Chr6 3019260 3020786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0210 3 280 Major Intrinsic Protein MIP AT4G23400 84.859 1.18e-167 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0210 K09872 - gmx:100796833 525.013