Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0206 ATGGGAAAAGGAAACCCTAGGTCTGTAGAAAAACGTGTATTAGGTCAAAATCTCACAATTTCATCTCCAACTATACCACCTGCACCTGTTTATTATCCAACCGAAGATGAATTCAAAGATCCATTAGAATTTATTCATAAGATTAGAAATGAAGCTGAACCCTACGGAATTTGTAGAATTGTTCCACCTAAAAATTGGAAACCCCCTTTTGCATTGGATCTAGATTCTTTTACTTTTCCGACGAAGACGCAGGCGATTCATAAGCTTCAGGTTCGTCCTGCTGCGTGTGATTCGAAGACGTTTGAGTTGGAGTATTGTAGGTTTTTGAGGGATTATTGTGGGAAGAAGGTTAAGAAGAGGGTTGTTTTTGAAGGGGAGGATTTGGATTTGTGTAAGGTGTTTAATGGTGTTAAGAGGTTTGGTGGTTATGATAAGGTTGTTGATGGGAAGAAATGGGGAGAGGTTGCGAGGTTTGTTAGGAGTTCCGGGAAGATTTCGGATTGTGCTAAGCATGTTTTGTGTCAGTTGTATAGAGAGCATCTTTATGATTATGAGGTTTTTTGTAATAAGGTTAGTAAAGGAACAAGCACAAGCACGAGCGGGAGTTGTTGTAAGAAAGGTGGGGACGAGGTTGTTGATGGTTTGAAAATTAAGGATTTGACAGTGAAGGATTTGAAAAATAAGGATCGGAAAGTGAGGGAAGAGAATCGTGATCAGATTTGCGAGCAATGTAAAAGTGGGTTACATGGGGAGGTAATGCTTTTGTGTGATAGGTGTGATAAAGGATGGCATATTTATTGTCTTTCACCACCGTTGAAGCAAATTCCGTTGGGAAATTGGTATTGTTTCAATTGTTTGAGTTCTGATAGGGAGAGCTTTGGTTTTGTGCCGGGGAAGCAATATTCGTTGGAAACTTTTAGACGCATTGCGGATAGGTCGAGGAGGAGATGGTTTGGACAGGGACCTGTTTCGAGGGTGCAAATAGAGAAAAAATTCTGGGAGATTGTGGAGGGGTCGGTTGGTGAGGTCGAGGTTATGTATGGAAATGATTTGGATACGTCTATCTATGGGAGTGGTTTCCCGAATGAAGCTAATCAAAAACCACAATCTATTGATGATAAGTTATGGGAAGAATACTCTACTAACCCGTGGAATCTGAACAACTTGCCTAAGTTAAAAGGCTCAATGCTTCGAGCTGTTCATCACAATATCACTGGTGTTATGGTACCCTGGCTGTATATTGGAATGCTATTCTCATCCTTTTGCTGGCATTTTGAAGATCACTGCTTTTATTCAATGAATTATCTACACTGGGGAGAGCCAAAATGCTGGTACAGTGTTCCTGGTAGTCAAGCCAGGGCATTTGAGAAGGTGATGAGAAGCAGCCTTCCTGACCTTTTCGATGCACAGCCTGATCTGCTTTTTCAGCTTGTTACTATGTTAAACCCATCTGTTTTGCAAGAAAATGGAGTTCCTGTCTACAGCACGCTTCAGGAGCCTGGAAATTTTGTTATTACTTTCCCCAGAGCTTACCATGGTGGTTTCAATCTTGGCCTTAATTGTGCAGAGGCAGTCAATTTTGCTCCAGCTGACTGGCTACCACACGGTACATTTGGAGCTGATCTCTATAAGCGGTATCACAAAACAGCTGTCTTGTCTCATGAGGAGCTTCTTTGTGTAGTAGCCCAGTACGGTGATGTAGATAGCAGAGGGTCGTCTTATTTGAAAATAGAATTGCTGAAAATATCAGATAGAGAAAAATCTTGGAGGGAGAAACTTTGGAAAAATGGTATCGTTAAATCTTCTCGTTTAGCTCCTCGGAAATGTCCCCAATATGTAGGAACTGAAGATGATCCAACATGCATTATTTGCCAGCAATATCTCTACCTCTCTGCAGTTGAATGCAGTTGCAGGCCATCATCTTTTGTGTGTCTGGAGCACTGGGAACACCTTTGTGAGTGCAAAACTGCTAAACTTCGTCTTCTCTACCGTCATTCACTTGGTGAATTGTATGAGTTGGCATTTTCTATTGACAAATATACTTCTGAAGAAAAAGCTGAGAGTAGAAATGTAAAAAGGCAGTCTTCATGTCTGAGTGCTTTGACAAAAAAGGTGAATGGTTGCTCCATTACTTTCACTCAACTTGCTACAGAATGGCTTCTGCAATCTAGTACTATTCTTCAGAATGTTTTTGCGACTGATGCATCTATTACCGCACTAAGGAAAGCTGAACAGTTTCTCTGGGCTGGTTCCGAGATGGATTCTGTTCGAGATATGGTAAAGAGTTTGACTGAAGCTCAGAAATGGGCTGAAGGGATAAAAGATTGTGTGACAAAAGTTGAGTTGTGGTTGAGTCATCAGGACTCAAGTTTAAAGAAAATTCATTTAGAATATGTTGAAGAGTTTCTGAGATATAACCCTGTACCATGCAATGAGCCCCATTATCATAAATTGAAGGAATATGCAGAAGAAGCAAGATCGTTACTTCAGGAGATTGAGACTGCTTTGTCAATGTGCTCCAACATATCTGAATTGGAACTTCTATACTCTAGAGCTCGTGGCTTACCCTTCTACGTGAAAGAGACTAAAATATTGAAAGGGAAAATTTCATCAACTAAGGCATGGATGGGTAGTGTCAGAAATTGCATCTCAGCTAGAGATCCTGCTGAATTAGATGTTGATGTTCTTTACAACTTAAAATCAGAGATTGCAGATCTTCAAGTTCAACTCCCAGAGATAGATGCACTTCAGAATCTATTAAATCAGGCAGAATCTTGTAGTTCTCAATGTCGTTGTATGTTAGAAGGTCCTATGAATGTCAAGAATGTCGGTTTGCTGCTTAAGGAATGGGACAGTTTTACAGTTGATGTACCGGAGTTGAAGCTACTGAGGAATTACCATTCAGATGCTGTGTCATGGGTTTCTCACTTTAATGATGTTTTAGGGAGAGTTCACAGACAGGAAGATCAACATAATTCAGTTGATGAATTGAAGAGCATTCTTGAAGAAGGTTTATCTTTGAAAATTCATGTTGATGAGTTGCCTATAGTTGAGATTGAGCTGAAGAAGGCTAGTTGCCGACAGAAAGCTTTGAAGGCACATGATTCTAAGATGCCCATCGAATCCATTCAGCAACTGCTAAAGGAGGCCGCTATGCTAGAAATTGAGGGAGAGAAGCAATTCATCAGTTTATCTTGTGTGCTTGGTGTCGCCATGCGTTGGGAGGAAAGGGCCAAAGAGATTCTTACACTTGAGGCTTCTATTTCTGACTTTGAGGACATGATAAGTGCTTCAGAAAATATATTTGTTATTCTTGCGTTACTTAATGATGTTAAAGAAGCGTTATCGGAAGCTAATTCCTGGTTAAGGAATTCGAAGCCATATTTAGTCTCTTCTAATTGTGTGTCAAACTCTGTGCGGAAAGTTGAGGACTTGCAGTTGTTGGTTTCTCAATCAAAGCATCTTAAAGTATCGTTGGAAGAAAGAAGGACACTTGAATTAGTTTTGAATGACTGCAAAAAATGGGAGTGTGAAGCACGTTCTCTACTTGATGATGCTCGGTGCTTATTTGAATTGGATACCACTGTTCATGGAATAAGCAGTGGTTTATTGTTTAAAGTGGAAGATTTGATTGCAAGAATCCAGTCCGCCATAACATCTGGTGTATCTCTTGGTTTTGACTTCAGTGATATTTCAAAACTTCAAGCATCTAGTTCTACACTAGAGTGGTGCAAAAGAGCCCTATGTTTCTGCAATCATTCTCCTTGTTTAGAGGATGTTTTGGAAGTTGTGGAAGGCCTCTCTCATTCCTCTGTTTCTGGTGCTCTATTGAAAGTACTGGTTGATGGGGTTGAATGGCTTAGGAGAGCGTTAGAGGGGATTTCTAGACCTTGCAATTCTAGAAGATGCAAATTGACTGATATTCAAGAGATTCTTACTGATTATCAGACTATTAAAATGACCTTTAATGGAGTAAATTGTCAACTTGAAGAAGCCATTGGAAAACATAGGTCATGGCAAGAGCAAGTGCGTCAATTTTTTAGCCTAAGTTCTACGGAACGAACTTGGTCATCAATATTGCAGCTTAAGGAACGTGGAGATACCATTGCCTTTAGTTGCTCAGAACTTGATTTAATATTATCTGAAGTTGAGAAGGTGGAAAATTGGAAGAAAAGATGCATGGATAATATTGGAGCTTTATTCCAAAAAGAAAATTCGCTGCTTCATGCACTGCAGAAGATAAAACAGAATCTAGATAGATCGCTATACATATATGGCAAGTTGCAAAATCAGAAGGAACCAAACCTATGTAACTGCTGCTTTGTTGATTCTGAAGATCAGGAATTTCTTACTTGTTCTACTTGTATGGACTGCTATCACTTGCGGTGCATTGGGCTAACATCAAAAGACACTGGCCTCGGATTCTATAAGTGCTCTTACTGTGAAATTTTGAAGGGGAAATCCCAATATTCAAATGGAAGTTCCCTCCTGAGGTTTGAGAAGCATATTGAATTGAACGTTCTTGTCAAACTTCTGTCTGATGCTGAACATTTCTGTCTGTGGATTGACGAAAAAGATCTTCTGAACCAACTTATTGAGAAGGCTTTTGCATGCAAATCTGGCTTGAGAGAAATAGTGAACCTTTCATCAGCTTATGTCAACGAAGATATTACCATCATCTCTGAAAAATTGACCATTGCTATAAAGGCTAGCAAAGTGGCTGGTGTCTATGATCAAGGTGATAAATGTGACCTTGAGCTGGCTTTAGCAAAATACTTGTGGAAAATTCAAGTCAATATATTATTAAGTGGTGTACAAAAGCCCACTATTGAACAGATTCAGAAACATCTGAAAGAGGGAACGTCTATGGAAATATCACCCAAAGATCACTACATGCTGAAACTTACAAATGTGAATTGCTTGGGCTTGCACTGGGTAGAAATAGCCAAAAAGGTATCAAATGACTCTGGAGCTTATAGCCTTGATAAAGTGTATGAACTTGCAGTGGAAGGTGAAAACTTGCCTGTTGATGTAAATGAGGAACTCAGGATGTTAAGAGCTCGATGCATGCTTTATTGCATTTGTCGAACGCCCTTTGATCCCGGGAGGATGATTGCGTGTTATCAATGTAGTGAGTGGTATCACTTTGATTGTATGAAATTATCATGCACGCAAGATATGTACATTTGCCCTGCGTGTATCCCGTGTACAACATTGCCTACTAACCATGACAGATTAACTAGTGGGAAACTCGAGGAGCCTAAAACCCCTTCTCCGAGGCATACAAACCCTAGAAAGAAACAGAAGAGAGATGTGCCCAGTCACACTCGCAACATGTTTGCACCTAGGAATGAAGATGGTAGTATTTATAGGTATCTAAACGAGACAGAATGTCTAAGGTGGAGAAATCAAAAGCCGTTTAGAAGAGCAACTAAGAGACGTGTTGAACTTCAAAATCTTTCTCCATTTCTATATGCATAA 5481 0.3994 MGKGNPRSVEKRVLGQNLTISSPTIPPAPVYYPTEDEFKDPLEFIHKIRNEAEPYGICRIVPPKNWKPPFALDLDSFTFPTKTQAIHKLQVRPAACDSKTFELEYCRFLRDYCGKKVKKRVVFEGEDLDLCKVFNGVKRFGGYDKVVDGKKWGEVARFVRSSGKISDCAKHVLCQLYREHLYDYEVFCNKVSKGTSTSTSGSCCKKGGDEVVDGLKIKDLTVKDLKNKDRKVREENRDQICEQCKSGLHGEVMLLCDRCDKGWHIYCLSPPLKQIPLGNWYCFNCLSSDRESFGFVPGKQYSLETFRRIADRSRRRWFGQGPVSRVQIEKKFWEIVEGSVGEVEVMYGNDLDTSIYGSGFPNEANQKPQSIDDKLWEEYSTNPWNLNNLPKLKGSMLRAVHHNITGVMVPWLYIGMLFSSFCWHFEDHCFYSMNYLHWGEPKCWYSVPGSQARAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLQENGVPVYSTLQEPGNFVITFPRAYHGGFNLGLNCAEAVNFAPADWLPHGTFGADLYKRYHKTAVLSHEELLCVVAQYGDVDSRGSSYLKIELLKISDREKSWREKLWKNGIVKSSRLAPRKCPQYVGTEDDPTCIICQQYLYLSAVECSCRPSSFVCLEHWEHLCECKTAKLRLLYRHSLGELYELAFSIDKYTSEEKAESRNVKRQSSCLSALTKKVNGCSITFTQLATEWLLQSSTILQNVFATDASITALRKAEQFLWAGSEMDSVRDMVKSLTEAQKWAEGIKDCVTKVELWLSHQDSSLKKIHLEYVEEFLRYNPVPCNEPHYHKLKEYAEEARSLLQEIETALSMCSNISELELLYSRARGLPFYVKETKILKGKISSTKAWMGSVRNCISARDPAELDVDVLYNLKSEIADLQVQLPEIDALQNLLNQAESCSSQCRCMLEGPMNVKNVGLLLKEWDSFTVDVPELKLLRNYHSDAVSWVSHFNDVLGRVHRQEDQHNSVDELKSILEEGLSLKIHVDELPIVEIELKKASCRQKALKAHDSKMPIESIQQLLKEAAMLEIEGEKQFISLSCVLGVAMRWEERAKEILTLEASISDFEDMISASENIFVILALLNDVKEALSEANSWLRNSKPYLVSSNCVSNSVRKVEDLQLLVSQSKHLKVSLEERRTLELVLNDCKKWECEARSLLDDARCLFELDTTVHGISSGLLFKVEDLIARIQSAITSGVSLGFDFSDISKLQASSSTLEWCKRALCFCNHSPCLEDVLEVVEGLSHSSVSGALLKVLVDGVEWLRRALEGISRPCNSRRCKLTDIQEILTDYQTIKMTFNGVNCQLEEAIGKHRSWQEQVRQFFSLSSTERTWSSILQLKERGDTIAFSCSELDLILSEVEKVENWKKRCMDNIGALFQKENSLLHALQKIKQNLDRSLYIYGKLQNQKEPNLCNCCFVDSEDQEFLTCSTCMDCYHLRCIGLTSKDTGLGFYKCSYCEILKGKSQYSNGSSLLRFEKHIELNVLVKLLSDAEHFCLWIDEKDLLNQLIEKAFACKSGLREIVNLSSAYVNEDITIISEKLTIAIKASKVAGVYDQGDKCDLELALAKYLWKIQVNILLSGVQKPTIEQIQKHLKEGTSMEISPKDHYMLKLTNVNCLGLHWVEIAKKVSNDSGAYSLDKVYELAVEGENLPVDVNEELRMLRARCMLYCICRTPFDPGRMIACYQCSEWYHFDCMKLSCTQDMYICPACIPCTTLPTNHDRLTSGKLEEPKTPSPRHTNPRKKQKRDVPSHTRNMFAPRNEDGSIYRYLNETECLRWRNQKPFRRATKRRVELQNLSPFLYA* 1827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0206 1826 CDD ARID 97 185 - -
Mal6g0206 1826 Pfam JmjC domain, hydroxylase 411 527 IPR003347 -
Mal6g0206 1826 SUPERFAMILY ARID-like 78 194 IPR036431 GO:0003677
Mal6g0206 1826 SMART JmjN_1 27 68 IPR003349 -
Mal6g0206 1826 SMART cupin_9 378 544 IPR003347 -
Mal6g0206 1826 ProSiteProfiles JmjC domain profile. 378 544 IPR003347 -
Mal6g0206 1826 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1678 1735 IPR013083 -
Mal6g0206 1826 SUPERFAMILY FYVE/PHD zinc finger 234 288 IPR011011 -
Mal6g0206 1826 SMART bright_3 96 190 IPR001606 GO:0003677
Mal6g0206 1826 Pfam jmjN domain 29 62 IPR003349 -
Mal6g0206 1826 ProSitePatterns Zinc finger PHD-type signature. 241 285 IPR019786 -
Mal6g0206 1826 CDD PHD_RSF1 241 285 - -
Mal6g0206 1826 SMART PHD_3 1436 1482 IPR001965 -
Mal6g0206 1826 SMART PHD_3 1692 1734 IPR001965 -
Mal6g0206 1826 SMART PHD_3 240 286 IPR001965 -
Mal6g0206 1826 SMART ARID_2 93 185 - -
Mal6g0206 1826 Pfam PLU-1-like protein 1138 1411 IPR013637 -
Mal6g0206 1826 Pfam PLU-1-like protein 886 980 IPR013637 -
Mal6g0206 1826 Pfam PLU-1-like protein 939 1182 IPR013637 -
Mal6g0206 1826 ProSiteProfiles JmjN domain profile. 28 69 IPR003349 -
Mal6g0206 1826 Pfam ARID/BRIGHT DNA binding domain 105 185 IPR001606 GO:0003677
Mal6g0206 1826 ProSiteProfiles ARID domain profile. 95 189 IPR001606 GO:0003677
Mal6g0206 1826 PANTHER LYSINE-SPECIFIC DEMETHYLASE 23 792 - -
Mal6g0206 1826 Gene3D Cupin 225 550 - -
Mal6g0206 1826 Pfam PHD-finger 240 287 IPR019787 -
Mal6g0206 1826 PANTHER LYSINE-SPECIFIC DEMETHYLASE LID 23 792 - -
Mal6g0206 1826 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1423 1488 IPR013083 -
Mal6g0206 1826 SUPERFAMILY FYVE/PHD zinc finger 1433 1483 IPR011011 -
Mal6g0206 1826 Pfam C5HC2 zinc finger 621 673 IPR004198 -
Mal6g0206 1826 SUPERFAMILY FYVE/PHD zinc finger 1679 1737 IPR011011 -
Mal6g0206 1826 ProSitePatterns Zinc finger PHD-type signature. 1693 1733 IPR019786 -
Mal6g0206 1826 Coils Coil 815 838 - -
Mal6g0206 1826 MobiDBLite consensus disorder prediction 1747 1782 - -
Mal6g0206 1826 Gene3D Cupin 12 121 - -
Mal6g0206 1826 ProSiteProfiles Zinc finger PHD-type profile. 238 288 IPR019787 -
Mal6g0206 1826 SUPERFAMILY Clavaminate synthase-like 334 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0206 Mal-Chr6 2931087 2952653 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0206 37 92 JUMONJI Transcription Factor Family AT4G20400 50.000 7.92e-10 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Mal6g0206 PLU-1 3.1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0206 K11446 - gmx:100789512 2958.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0206 6 2931087 2952653 Mal6g0206 6 2931087 2952653 ECH