Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0204 ATGGATGAGAGAGAAGCTATGGCATACTCTGATGGGTCAGGTTCATATTACATGCATAGAGAAAGAGGGGTTGGTGGGTCTGGTAATGGAGGAGTGTTTCAACAACCTCCTCCTGGGTTTAGAGCTTTGTCTAATGTTCATGGTGGTTCTGATGGTTCTGCATTTTCTGTAGAGCCTCAACATAGTAATTTTGGTCATGGTGCTTTAGTGCCTTATTCAGGGGAGTTGTCTGGGAAAAAGAAAAGAGGGAGGCCTAGGAAGTATGGTCCTGATGTACCTGTTTCTTTGAGACTCTCTCCTATGTCTGCTACTGCTAATTCAACTCCTGATTCGGAGAAACGGCCGAGAGGGCGCCCGCCTGGAAGTGGAAGGAAACAACAGCTAGCTGCTCTAGGTGAATGGATGAACAGTTCCGCTGGACAGGCTTTTTCACCTCATGTTATCACCATTGGAGTTCAAGAGGACATTGTAGCTAAGTTATTGTCATTTTCACAACATAGACCACGCACTTTATGCATCTTGTCCGGAACTGGGACTGTATCTTCAGTCACTCTGCGCCAGCCTGCTTCTACCAGTGTCAGTGTTACATACGAGGGTCGATTCCAAATATTATGCTTATCTGGTTCTTACTTGGTTGCTGAAGATGGTGGACCTCACAATAGAATGGGTGGCATTAGTGTTTCCCTTTCTAGTACGGATGGTCATGTTATCGGTGGTGCTGCTGCTAAGCTTATTGCTGCAAGCCCTGTCCAGGTGGTAGTTTGTAGTTTTGTGTACGGCGGTTCTAAGCCAAAGACAACAAAGCAAGAGACTGCTGCAAAAGACGATGATGATTCTGAGCCTCAGAGTAGTGACAAACTAGTTTCTCCAGGAAGTGAACCACCTAATCAAAACTACACAGCTTCTGGAACAGGCACAATGTGGCTTGGATCAAGGACAGTAGACGTGAAAAGTGAACATCCACACACTGGTTTTGACTTGATGCATGGGTGA 993 0.4592 MDEREAMAYSDGSGSYYMHRERGVGGSGNGGVFQQPPPGFRALSNVHGGSDGSAFSVEPQHSNFGHGALVPYSGELSGKKKRGRPRKYGPDVPVSLRLSPMSATANSTPDSEKRPRGRPPGSGRKQQLAALGEWMNSSAGQAFSPHVITIGVQEDIVAKLLSFSQHRPRTLCILSGTGTVSSVTLRQPASTSVSVTYEGRFQILCLSGSYLVAEDGGPHNRMGGISVSLSSTDGHVIGGAAAKLIAASPVQVVVCSFVYGGSKPKTTKQETAAKDDDDSEPQSSDKLVSPGSEPPNQNYTASGTGTMWLGSRTVDVKSEHPHTGFDLMHG* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0204 330 MobiDBLite consensus disorder prediction 265 307 - -
Mal6g0204 330 SUPERFAMILY AF0104/ALDC/Ptd012-like 141 259 - -
Mal6g0204 330 MobiDBLite consensus disorder prediction 284 307 - -
Mal6g0204 330 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 330 - -
Mal6g0204 330 MobiDBLite consensus disorder prediction 1 127 - -
Mal6g0204 330 PRINTS AT-hook-like domain signature 111 122 IPR017956 GO:0003677
Mal6g0204 330 PRINTS AT-hook-like domain signature 79 89 IPR017956 GO:0003677
Mal6g0204 330 ProSiteProfiles PPC domain profile profile. 140 279 IPR005175 -
Mal6g0204 330 MobiDBLite consensus disorder prediction 268 283 - -
Mal6g0204 330 Pfam Plants and Prokaryotes Conserved (PCC) domain 145 258 IPR005175 -
Mal6g0204 330 CDD DUF296 145 257 IPR005175 -
Mal6g0204 330 Gene3D - 145 274 - -
Mal6g0204 330 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 330 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0204 Mal-Chr6 2916538 2919680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0204 1 330 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 46.954 1.73e-89 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0204 - - cam:101497147 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0204 6 2916538 2919680 Mal6g0204 6 2916538 2919680 ECH
Mal6g0204 6 2916538 2919680 Mal7g4915 7 117835102 117838071 PCT